Hevea brasiliensis (rubber tree): 110631873
Help
Entry
110631873 CDS
T05150
Name
(RefSeq) uncharacterized protein LOC110631873
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110631873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110631873
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110631873
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110631873
Messenger RNA biogenesis [BR:
hbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
110631873
DNA repair and recombination proteins [BR:
hbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
110631873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
CP2
NPP
Motif
Other DBs
NCBI-GeneID:
110631873
NCBI-ProteinID:
XP_021635561
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MISTLKKFFGYSGFRPYQKEVIEKILERRDCLVVMATGSGKSLCYQVPPLLVGKTAIVIS
PLVSLMQDQVMALKQRGIKAEYLGTGQSDHSVHNLAQSGHFHLLFMTPEKACLLPVSFWS
KLLEVGICLLAVDEAHCISEWGHDFRVEYKQLDKLRNILLDVPFVGLTATATEKVRIDII
NSLRMNDPYVAIGSFDRKNLFYGVKHFNRGTLFMDKLVQEISKFAGNGGSTIVYCTTIKD
VEQIFKSLQEIGIKTGIYHGKMSSKAREESHRSFIRDELHVMVATIAFGMGIDKPDIRQV
IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTGSDFTKADFYCGELKTENQRKAVVESL
MIAQKYCILATCRRKFLLDYFGEHVSADNCGNCDNCRFSKKERDLSREAFLLMACIQSCR
GKWGLNMPIDVLRGSRAKKILDVHFDKLPLHGLGKSYSSNWWKSLAYQLISHGFLVETIE
DVYKFVSVGEKGVQFLSSARPDYQPRLVLPLTSEMADDEEYQSATSGVGEFKNFVTLESE
GFSEAEVQLYHMLLEERMKLARIIGTAPYAICGDQTIKKIALTRPSTKARLANIDGVNQH
LVTRHGDHLLQTVRHLSQKLNLSLDGEASLQTANARKVHPITIPNQQRKLSSAKFEAWKM
WHEDGLSIQKIANFPGRSAPIKEQTVCEYLLDAAQDGFEIDWIRFCHEIGLTREIFVDIQ
AAINKVGSRDKLKPIKNELPENISYTHIKTCLQMHSCGMSLEVVPPSHLSMSKVGELQNQ
VSDNSTVTRTQEREVHPIHDEDLYSPDKRQKINENEGSSTVLEATENSILNWLKTYEEGV
SLSDILEHFNGSKRESVIDLLSTLEGDFMIFKKKDLYRLL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgatatccactctcaagaaattctttgggtattctgggtttcggccataccagaaggag
gtgatcgagaaaattcttgagagaagggattgtctggtcgtcatggccactggcagtgga
aagtctttgtgctaccaggttcctcctttgcttgtgggaaagactgccatagtcataagc
cctcttgtatctttgatgcaagaccaggtgatggctttgaaacaaaggggaatcaaagct
gaatatcttggaactggtcagagtgatcactctgtccataatttagctcaaagtggtcat
tttcatttattattcatgactcctgaaaaggcatgtttacttcctgtcagcttctggtca
aaattgctagaggttggaatttgtctgcttgccgttgacgaggcacattgtatatcagaa
tggggccatgatttcagggtggaatacaagcaattagacaagctacgcaatattctcttg
gatgttccattcgttggcttaactgcaactgcaacagaaaaggttagaatcgacatcatc
aattccctaagaatgaacgatccttatgtggccattggctcatttgaccgaaaaaatctc
ttctatggtgtcaaacatttcaatcgtggtacactttttatggacaagcttgtgcaagaa
atttcaaaatttgcagggaatggtgggtcaactattgtttactgcacaacaataaaagat
gttgaacagattttcaagtcacttcaggagataggaattaagaccggaatctaccatggc
aaaatgagcagcaaagctcgtgaggagtcccataggtcatttataagagatgaactacat
gtcatggttgccactattgcttttgggatgggcattgataagccggacataaggcaagtg
atacattatggttgcccaaagagtctagagtcctattatcaggaaagtggacgatgcgga
agagacggtatagcttctgtctgttggctttattatacaggaagtgactttacgaaagct
gacttctactgtggagaattgaaaacagaaaatcagagaaaagctgttgtggagtcattg
atgattgcacaaaagtattgcatattggcaacttgtagaagaaagttcttgcttgattac
tttggagaacatgtttcagctgacaattgtggaaattgtgataattgtaggttctcaaag
aaggaacgcgacctgtcaagggaagcgtttcttttgatggcttgcattcaatcatgtagg
ggtaaatggggtctcaatatgcctatagacgttcttcgtgggtctcgagcaaaaaaaatt
cttgatgtgcattttgacaagcttccacttcatggacttgggaaaagctactcttcaaat
tggtggaaatcattggcttatcaattgatctctcatggttttctggtggagactattgag
gatgtgtacaaatttgtaagtgttggtgagaaaggagtgcaatttcttagctctgctaga
cctgattatcaaccacgactagttttgccattgactagtgaaatggctgatgatgaggaa
tatcaaagtgcaacaagtggagttggagaattcaagaattttgtgactctggaatctgaa
ggtttttcggaggctgaggtacaactctatcacatgcttttggaagagaggatgaagctt
gctagaatcattgggactgctccatatgctatatgtggtgatcaaacaataaaaaaaatt
gccttgacaaggccatcaacaaaagctaggttagcaaacattgatggtgtcaaccagcat
cttgtcacgaggcatggagatcatcttcttcaaacagttaggcatctttcacaaaaatta
aacctttccttggatggtgaagcaagtttacagactgctaatgccagaaaggtgcatcca
attacaatacccaaccaacagagaaaattgtcatcagctaagtttgaagcatggaaaatg
tggcatgaagatggtctatcaattcaaaaaattgcaaatttccctggtagatcagctcct
ataaaagaacaaactgtctgtgaatatcttctggatgctgcccaagatggttttgagatc
gattggatcagattttgtcatgagattggactgacaagggaaattttcgtagatattcaa
gctgccatcaacaaggttggctctagagacaagctaaagcccattaaaaatgaattgcct
gaaaacataagttatacacacatcaagacttgtctgcaaatgcacagctgtgggatgtct
ctagaagtggtaccacctagccacctgagtatgtcaaaggttggtgagcttcagaaccaa
gtgtctgataatagtactgtcacaaggacacaagaaagagaggtacatcctatccatgat
gaagatctgtactccccagataagcgtcaaaaaataaacgaaaatgaaggaagttccact
gtgttggaggcaacagagaattccatattaaactggcttaagacctatgaagaaggggtt
tcgttgtctgatattttggagcacttcaatgggtccaaaagggaatctgtgattgatctg
ctgagtacgcttgaaggtgactttatgatatttaaaaagaaagatctgtacaggcttttg
tga
DBGET
integrated database retrieval system