KEGG   Hevea brasiliensis (rubber tree): 110631873
Entry
110631873         CDS       T05150                                 
Name
(RefSeq) uncharacterized protein LOC110631873
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110631873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110631873
   03400 DNA repair and recombination proteins [BR:hbr03400]
    110631873
Enzymes [BR:hbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     110631873
Messenger RNA biogenesis [BR:hbr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     110631873
DNA repair and recombination proteins [BR:hbr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      110631873
SSDB
Motif
Pfam: DEAD Helicase_C RQC HTH_40 HRDC RecQ_Zn_bind ResIII CP2 NPP
Other DBs
NCBI-GeneID: 110631873
NCBI-ProteinID: XP_021635561
LinkDB
Position
Unknown
AA seq 880 aa
MISTLKKFFGYSGFRPYQKEVIEKILERRDCLVVMATGSGKSLCYQVPPLLVGKTAIVIS
PLVSLMQDQVMALKQRGIKAEYLGTGQSDHSVHNLAQSGHFHLLFMTPEKACLLPVSFWS
KLLEVGICLLAVDEAHCISEWGHDFRVEYKQLDKLRNILLDVPFVGLTATATEKVRIDII
NSLRMNDPYVAIGSFDRKNLFYGVKHFNRGTLFMDKLVQEISKFAGNGGSTIVYCTTIKD
VEQIFKSLQEIGIKTGIYHGKMSSKAREESHRSFIRDELHVMVATIAFGMGIDKPDIRQV
IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTGSDFTKADFYCGELKTENQRKAVVESL
MIAQKYCILATCRRKFLLDYFGEHVSADNCGNCDNCRFSKKERDLSREAFLLMACIQSCR
GKWGLNMPIDVLRGSRAKKILDVHFDKLPLHGLGKSYSSNWWKSLAYQLISHGFLVETIE
DVYKFVSVGEKGVQFLSSARPDYQPRLVLPLTSEMADDEEYQSATSGVGEFKNFVTLESE
GFSEAEVQLYHMLLEERMKLARIIGTAPYAICGDQTIKKIALTRPSTKARLANIDGVNQH
LVTRHGDHLLQTVRHLSQKLNLSLDGEASLQTANARKVHPITIPNQQRKLSSAKFEAWKM
WHEDGLSIQKIANFPGRSAPIKEQTVCEYLLDAAQDGFEIDWIRFCHEIGLTREIFVDIQ
AAINKVGSRDKLKPIKNELPENISYTHIKTCLQMHSCGMSLEVVPPSHLSMSKVGELQNQ
VSDNSTVTRTQEREVHPIHDEDLYSPDKRQKINENEGSSTVLEATENSILNWLKTYEEGV
SLSDILEHFNGSKRESVIDLLSTLEGDFMIFKKKDLYRLL
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgatatccactctcaagaaattctttgggtattctgggtttcggccataccagaaggag
gtgatcgagaaaattcttgagagaagggattgtctggtcgtcatggccactggcagtgga
aagtctttgtgctaccaggttcctcctttgcttgtgggaaagactgccatagtcataagc
cctcttgtatctttgatgcaagaccaggtgatggctttgaaacaaaggggaatcaaagct
gaatatcttggaactggtcagagtgatcactctgtccataatttagctcaaagtggtcat
tttcatttattattcatgactcctgaaaaggcatgtttacttcctgtcagcttctggtca
aaattgctagaggttggaatttgtctgcttgccgttgacgaggcacattgtatatcagaa
tggggccatgatttcagggtggaatacaagcaattagacaagctacgcaatattctcttg
gatgttccattcgttggcttaactgcaactgcaacagaaaaggttagaatcgacatcatc
aattccctaagaatgaacgatccttatgtggccattggctcatttgaccgaaaaaatctc
ttctatggtgtcaaacatttcaatcgtggtacactttttatggacaagcttgtgcaagaa
atttcaaaatttgcagggaatggtgggtcaactattgtttactgcacaacaataaaagat
gttgaacagattttcaagtcacttcaggagataggaattaagaccggaatctaccatggc
aaaatgagcagcaaagctcgtgaggagtcccataggtcatttataagagatgaactacat
gtcatggttgccactattgcttttgggatgggcattgataagccggacataaggcaagtg
atacattatggttgcccaaagagtctagagtcctattatcaggaaagtggacgatgcgga
agagacggtatagcttctgtctgttggctttattatacaggaagtgactttacgaaagct
gacttctactgtggagaattgaaaacagaaaatcagagaaaagctgttgtggagtcattg
atgattgcacaaaagtattgcatattggcaacttgtagaagaaagttcttgcttgattac
tttggagaacatgtttcagctgacaattgtggaaattgtgataattgtaggttctcaaag
aaggaacgcgacctgtcaagggaagcgtttcttttgatggcttgcattcaatcatgtagg
ggtaaatggggtctcaatatgcctatagacgttcttcgtgggtctcgagcaaaaaaaatt
cttgatgtgcattttgacaagcttccacttcatggacttgggaaaagctactcttcaaat
tggtggaaatcattggcttatcaattgatctctcatggttttctggtggagactattgag
gatgtgtacaaatttgtaagtgttggtgagaaaggagtgcaatttcttagctctgctaga
cctgattatcaaccacgactagttttgccattgactagtgaaatggctgatgatgaggaa
tatcaaagtgcaacaagtggagttggagaattcaagaattttgtgactctggaatctgaa
ggtttttcggaggctgaggtacaactctatcacatgcttttggaagagaggatgaagctt
gctagaatcattgggactgctccatatgctatatgtggtgatcaaacaataaaaaaaatt
gccttgacaaggccatcaacaaaagctaggttagcaaacattgatggtgtcaaccagcat
cttgtcacgaggcatggagatcatcttcttcaaacagttaggcatctttcacaaaaatta
aacctttccttggatggtgaagcaagtttacagactgctaatgccagaaaggtgcatcca
attacaatacccaaccaacagagaaaattgtcatcagctaagtttgaagcatggaaaatg
tggcatgaagatggtctatcaattcaaaaaattgcaaatttccctggtagatcagctcct
ataaaagaacaaactgtctgtgaatatcttctggatgctgcccaagatggttttgagatc
gattggatcagattttgtcatgagattggactgacaagggaaattttcgtagatattcaa
gctgccatcaacaaggttggctctagagacaagctaaagcccattaaaaatgaattgcct
gaaaacataagttatacacacatcaagacttgtctgcaaatgcacagctgtgggatgtct
ctagaagtggtaccacctagccacctgagtatgtcaaaggttggtgagcttcagaaccaa
gtgtctgataatagtactgtcacaaggacacaagaaagagaggtacatcctatccatgat
gaagatctgtactccccagataagcgtcaaaaaataaacgaaaatgaaggaagttccact
gtgttggaggcaacagagaattccatattaaactggcttaagacctatgaagaaggggtt
tcgttgtctgatattttggagcacttcaatgggtccaaaagggaatctgtgattgatctg
ctgagtacgcttgaaggtgactttatgatatttaaaaagaaagatctgtacaggcttttg
tga

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