Hevea brasiliensis (rubber tree): 110672964
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Entry
110672964 CDS
T05150
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110672964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110672964
Enzymes [BR:
hbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110672964
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
110672964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
PAP_RNA-bind
UbiA
Motif
Other DBs
NCBI-GeneID:
110672964
NCBI-ProteinID:
XP_021691611
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MEANAYQNQRNVIVFPVPPLYRFLPLPPVNPSFGLINPSFHGKVLFPYNLPPPAPFGFGF
SPSFLIPMEDERSVSLQKFMVNEGLVPSLEEEERRKNVISKLKKLVVAWAKKVAWQRRLP
REQIAATCATILTYGSYGLGVHGPESDIDALCVGPFFATMAEDFFIVLRNMLKSRPEVSD
IHCVKDAKVPLMRFKFDGISVDLPYAQLKLLVVPDNLDVLNPFFLRNIDETSWKSLSGVR
ANQQILQLVPNLENFQSMLRYVKLWAKRRGVYGNLNGFLGGVHLAILAAYVCQNHPNAGV
STLISSFFSTFAAWPWPTPVVLQDGIPSTAGAVIETRSFMPIRLPCSPLEYCHSNITKST
FYKIRSEFLRGHDSTKDFLNPGFDWNTIFQPFPYSKKYTRFIKIYLSASDQDELGDWVGW
VKSRFRCLLLKLEGLQGFCDPNPTEYVDMDVLDPNVVFYWGLNPTRSSFMNIESVEEDFL
GNIYSGYHGIPRKIELSIVQASELPSNVQFNSGNGKKMKACWKIVNEQRIPAYSSHLPGY
FVGYEATNGDTKHLSAGG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaatgcataccaaaaccagagaaacgtcatcgtctttcctgtgcctcctctg
tatcgtttccttccacttccacctgtgaacccctcatttggtttgataaaccccagtttt
cacggtaaggttttgtttccgtacaatcttccaccaccagcaccttttggattcggtttc
agtccttcattcttgattccaatggaggacgaaaggtctgtctcgcttcaaaagttcatg
gttaatgagggattggtgccgtctctggaagaggaagagaggaggaaaaatgttatttca
aagctcaagaagttagtggtggcatgggctaagaaggttgcctggcagcgtcggcttcct
agagaacaaattgcagccacatgcgccacaatattaacatatgggtcctatggtcttggg
gttcatggtccagagtctgatattgatgctttgtgtgttggtcctttctttgccaccatg
gctgaggacttttttattgttctacgaaacatgcttaaaagcagaccggaagtatcagat
attcattgtgtgaaggatgcaaaagttcctcttatgcggttcaaatttgatggtatctca
gttgaccttccatatgctcagcttaaattattagttgttcctgataacttggatgtactt
aatccattctttttgaggaatattgatgaaaccagttggaagagtttatctggtgtgcgt
gctaatcaacagattcttcaacttgttccaaacctagagaatttccaatcaatgctacga
tatgttaaactgtgggcaaagaggcgaggagtgtatggtaatctaaatgggtttctggga
ggtgttcatttggcaattttagcggcgtatgtttgtcaaaatcatccaaatgccggtgtc
agcactttaatatcaagcttcttcagtacttttgctgcttggccttggccaacacctgtg
gtgctgcaagatggaattccatcaactgctggagctgtgattgagacgcggtccttcatg
cccattcgtttgccatgtagtccacttgaatattgccattccaatatcactaagagcaca
ttctacaagatcagatcggagtttctcagagggcacgattcaacaaaggattttttgaat
ccaggttttgattggaataccattttccagccttttccatattcgaagaagtatacccga
tttatcaaaatttacctttcagcttctgatcaagatgagctaggagattgggtgggttgg
gtgaagtcccgtttccgctgtctacttcttaagcttgaagggctgcaaggcttttgtgac
cccaaccccacggaatatgttgacatggatgtattggatccaaatgtggttttctactgg
ggtctaaatccgactaggagtagtttcatgaacatagaatcagttgaggaggatttcctg
gggaatatatacagtggctaccatggtattcctagaaagatagaattatcaattgtgcaa
gcttctgaactgcccagcaatgttcagttcaatagtggaaatgggaagaaaatgaaagcc
tgttggaagattgtgaacgagcaaaggatcccagcatactcatcacacctgccaggctac
ttcgtcgggtatgaggcaactaatggagacaccaagcacctaagtgccggaggttaa
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