KEGG   Hyperthermus butylicus: Hbut_0421
Entry
Hbut_0421         CDS       T00468                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hbu  Hyperthermus butylicus
Pathway
hbu03030  DNA replication
hbu03410  Base excision repair
hbu03420  Nucleotide excision repair
hbu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Hbut_0421
   03410 Base excision repair
    Hbut_0421
   03420 Nucleotide excision repair
    Hbut_0421
   03430 Mismatch repair
    Hbut_0421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hbu03032]
    Hbut_0421
   03400 DNA repair and recombination proteins [BR:hbu03400]
    Hbut_0421
Enzymes [BR:hbu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Hbut_0421
    6.5.1.6  DNA ligase (ATP or NAD+)
     Hbut_0421
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Hbut_0421
DNA replication proteins [BR:hbu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Hbut_0421
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Hbut_0421
DNA repair and recombination proteins [BR:hbu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Hbut_0421
   NER (nucleotide excision repair)
    Other NER factors
     Hbut_0421
   MMR (mismatch excision repair)
    Other MMR factors
     Hbut_0421
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2 EAD2
Other DBs
NCBI-ProteinID: ABM80287
UniProt: A2BJX6
LinkDB
Position
complement(410095..411921)
AA seq 608 aa
MSMPFSVLAETFEKLERVTARTQMLLYLVELFKKTPPEIIDKVVYFIQGKLWPDWKGLPE
LGIGEKMLIKAASIALHVSEKQIEQLVKKLGDTGKAIEMIKREKQQKQKAVGLLAFMQKP
SGGESTLTVEKVYDTLARIALVQGEGSRDIKLKLLAGLLAEASPREAKYIARFVEGRLRL
GVGDATIMEALAVVYGGSAAMRSVVERAYNLRADLGMVAKILATQGIDALKNIKPEVGVP
IRPMLAERLNDPVEIIKKLGGRALVEYKYDGERAQIHKKGDKIWIFSRRLENITHMYPDV
VEMAKKGIKAEEAIVEGEIVAIDPETGEFRPFQVLMHRRRKKDVHAVLSEIPVAVFLFDT
LYVNGEDLTLKPLPARHEVLEKIIEQSDTWRIAEGIVTSDPQELESFFLKAIEDGAEGVM
AKAIHDRSIYQAGARGWLWIKYKRDYKSEMSDTVDLVVIGAFYGKGRRGGKFGALLMAAY
DPDTDTFKSVCKVGSGFTDEDLERLDDMLKPYISDKKPARVDSQMKPDVWVEPTLVAEII
GAELTLSPIHTCCYGWVKSGAGISIRFPRFIRWRPDKGPEDATTTKELYEMYKRQLRRIK
EEEAPTGV
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctatgcccttctcagtgcttgcggaaaccttcgagaagcttgaaagggttacagct
agaacccaaatgctactatatcttgtagaactcttcaagaagacgccgccagagattata
gacaaggttgtctacttcatccagggcaagctgtggcccgactggaagggcctaccagag
cttggcattggcgagaagatgttgataaaggcggcctccatagccctccacgtatccgag
aagcagatagagcagcttgtaaagaagctgggggacaccggtaaggctattgagatgatt
aaacgggagaagcagcaaaagcagaaggcagtgggcctcctagccttcatgcagaagccc
tctggcggcgagagcacgctaactgtggagaaggtgtacgacactcttgcaagaatagcg
ctggttcagggtgagggtagcagagatatcaagctcaagctgctggcgggtctcctcgcg
gaggctagtccgcgcgaggcaaagtacattgcaagatttgttgagggacggttaaggctt
ggtgtgggcgacgccaccattatggaggctttagcagtagtctacggcggcagtgcggcg
atgaggagtgttgttgagagggcttacaatctccgggcagacctaggcatggtggctaag
atacttgcaacacaaggtatagacgctctcaagaacataaagccggaggtgggagtcccg
ataaggccaatgctcgcagagaggctcaacgatcctgtcgagataataaagaagctcggc
ggccgtgccctagtagagtacaagtatgacggtgaaagggcgcaaatacacaagaaaggc
gataagatatggatattctcccgtcgtctcgaaaacataacccacatgtacccagatgtt
gttgagatggctaagaaggggataaaggctgaggaagctatcgtagagggcgagatagta
gcgattgacccagagactggtgagttccggccattccaggtcctcatgcaccgcaggagg
aagaaagatgtacatgcagtcctctctgagatacctgtagcagtattcctctttgacacg
ctatacgttaacggcgaagacctaaccttgaagcccctaccagcacgccacgaggtcctc
gaaaagatcatagagcagagtgacacctggagaatcgccgagggcatagtaactagcgat
ccccaggagctggagagcttcttcctcaaggcaatcgaggatggtgctgaaggtgtaatg
gcgaaggcgattcatgatcgtagcatctaccaggcaggcgccaggggctggctatggatc
aagtataagagggactacaagtccgagatgagcgacacggtagacctagtagtcataggt
gcattctacggcaagggtagacgcggcggcaagttcggagcactgctcatggcggcctat
gaccccgacacagacacgttcaagagcgtatgcaaggttggcagcggcttcacagacgag
gacctcgaacgtctagacgatatgctgaaaccctacatcagcgacaagaaaccagcaaga
gttgatagccaaatgaagccggacgtgtgggtggagcctacgctcgtggcagagatcatt
ggtgcagagctaacgttaagccccatacatacatgctgttatggctgggtcaagtctggt
gcgggtatatcaataagattcccgcgcttcataaggtggaggcctgacaaaggccccgag
gatgctaccactacaaaggagctttacgagatgtataagagacagctgagaaggataaag
gaggaggaggcaccaaccggagtctag

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