KEGG   Helicobacter pylori PeCan18: HPPC18_04960
Entry
HPPC18_04960      CDS       T02036                                 
Name
(GenBank) VirD4 coupling protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
hca  Helicobacter pylori PeCan18
Pathway
hca03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPPC18_04960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hca02044]
    HPPC18_04960
Enzymes [BR:hca01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HPPC18_04960
Secretion system [BR:hca02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HPPC18_04960
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AFI02730
UniProt: I0EIG1
LinkDB
Position
complement(1046402..1048645)
AA seq 747 aa
MKMQFVKAFCVLFSILLIPLFFILANYYTFDALKSLRQAYFFSQSVFVGLYHGASIFDLK
FEVYLTMLISLMPFVATIYINFPKTTETSHGYARWANVKDIECFKIFSKEGFCKVVHRLG
VQFDNGFILGKFGFPKLRNVCYDKPLGAMIVAPPGAGKTACVALPNLLTLPNSCIITDIK
GELRDKTAGYRQKFLNNRILIFNPYGDDNTCYFNPFDKRIVEKMTFAEQLRHVKAVGDGI
FVDEEDHWVSKAKELFVFFALLQVVTKGHSSFYDVSIAPANDYAPLIHPKSPYYKQLYQH
DKKTGEVILDPQTNAPMKNPQSNVLKLFLNQVADQKYIDMNDEKNYDLREPEPPYGTKGA
LDEIIRTDARSWANTPDDEFGSIMSSFKRFMYVYKDPKVREATSKMSFDYEELRTGNISI
YIVIAQIDIGTLSSLVRAFLESIAKNLMVKESSKPEERIFIIADEFVRFGKLPFLLEMPA
LCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFT
RQSKNYSTEKGQLVFGGSSSYSHEGRNLLTAQDIMNINSDEVIVIVTGAKATPLKLKANY
WFKDKELLKRANLPIDLEVERQRVEEPIQPTTEIETTPNQNKADLEPSNKGEKVENESNE
RNTNENNPTTPQELENSNLKESEKDSESPITLENANENIEQGNHNEIDEILKKPLSEISM
EEKRALFKKMQQGNEESEQEVTQSTQS
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgaaaatgcaatttgtgaaggctttttgcgtgctttttagcattttacttatcccctta
ttttttatcttggcaaattattacacttttgatgccttaaagtcgttgagacaggcttat
ttcttttctcaaagcgtgtttgtagggctttatcatggggcaagcatctttgatttaaaa
tttgaagtctatcttactatgctaatctctttaatgccctttgtggctacgatttatatc
aatttcccaaaaaccacagaaacttcgcatggctatgcgagatgggctaatgttaaagat
atagaatgctttaaaatttttagcaaagagggcttttgtaaagtggtgcatagattaggg
gtgcaatttgataatggctttattctaggtaaatttggttttccaaagcttagaaatgtg
tgctatgacaagcccttaggagcgatgattgttgcaccccctggtgctggaaaaactgca
tgtgtggctttgccaaatttattgactttgcctaatagctgtattatcactgatattaaa
ggcgaactaagagataagaccgcaggttatagacaaaaattcttaaacaatagaatttta
atttttaatccttatggtgatgataacacttgctatttcaatccttttgataaaaggatt
gttgaaaagatgacctttgcggagcaattaaggcatgttaaagcagtaggcgatggtatt
tttgtagatgaagaagaccattgggtatctaaagctaaagagctttttgtcttttttgct
cttttacaagtagtaaccaaagggcatagctctttttatgatgtctctatcgcaccagct
aatgattatgcccccttaatacaccctaaaagcccttattacaagcaactttaccaacac
gataaaaagacaggcgaagttatcttagacccacaaactaacgcccccatgaaaaatccc
caatctaatgttttaaaactctttttaaatcaagtggctgaccaaaaatacatagatatg
aatgatgaaaaaaactatgacctaagagaacctgaacccccttatggaacaaaaggggcg
ttagatgagattataaggacagatgctaggagttgggcaaacactcctgatgatgaattt
gggagcattatgtcttcttttaagcgttttatgtatgtctataaagacccaaaagtgcgt
gaagctacttctaaaatgagctttgattatgaagaattaagaacgggcaatatcagtatt
tacattgtaatcgctcaaattgatataggcacactttcttctttagtaagagccttttta
gagagtattgctaaaaaccttatggtcaaagaaagctctaaacctgaagagcgtattttt
atcattgctgatgaatttgttagatttggtaagttgcctttcttgttagaaatgccagca
ctttgtcgctcttataatgttgtccccttattcatcacgcaagattatgcgatgattaga
aaatactatagcgatgatgatttgaaaatcttaaaaggcgtggtgcattataacattgtc
tttaagatgaatagtgctgaagatgctgagattgtctctaaggaagtgggcgaatttaca
agacaatctaaaaattattctaccgaaaaaggtcaattggtctttggaggtagctcttct
tatagccatgagggtagaaacttactcacagcccaagatattatgaatatcaattcagat
gaagtcattgttattgttacaggggctaaagctacccccttaaaactcaaagctaattat
tggttcaaagataaagagcttttaaaaagagctaatttgcctattgatttagaagtagag
agacaaagagttgaagagcctatacaacccactacagagattgaaacaacccctaatcaa
aacaaagctgacttagaaccaagtaataagggggaaaaagtagagaatgagagcaatgag
agaaacactaacgagaataatcccactacaccacaagagcttgaaaattcaaacttaaaa
gaaagcgagaaagacagtgaaagtcccattaccttagaaaatgctaatgaaaatatagag
caaggaaatcacaatgaaattgatgagattttaaaaaagccactgagtgaaatcagtatg
gaagagaaaagagccttatttaagaaaatgcaacaaggcaatgaagaaagcgaacaagaa
gttacacaaagcacccaaagttaa

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