Helicobacter cetorum MIT 00-7128: HCW_06945
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Entry
HCW_06945 CDS
T02032
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hce
Helicobacter cetorum MIT 00-7128
Pathway
hce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCW_06945 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hce03021
]
HCW_06945 (rpoZ)
03400 DNA repair and recombination proteins [BR:
hce03400
]
HCW_06945 (rpoZ)
Enzymes [BR:
hce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCW_06945 (rpoZ)
Transcription machinery [BR:
hce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HCW_06945 (rpoZ)
DNA repair and recombination proteins [BR:
hce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HCW_06945 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
RemA-like
DUF2533
Pox_F16
Motif
Other DBs
NCBI-ProteinID:
AFI04647
UniProt:
I0ENX8
LinkDB
All DBs
Position
complement(1508468..1508692)
Genome browser
AA seq
74 aa
AA seq
DB search
MKKERTESLVAQALKNIGNDRYVLDNLVFARVKQLNAGAKTLVNMDPKRHKLVDIAIREI
AEGKIDIDRIDERN
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagaaagaactgaaagcttggtagctcaagcattgaaaaatattggaaacgac
cgctatgtattagataatttggtatttgctcgtgtgaagcaattaaatgctggggcaaaa
actttggtaaatatggaccctaagcgccataaattggtagatattgcaattcgtgagatt
gctgaaggcaaaattgatatagataggatagatgaacgaaattga
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