Hahella chejuensis: HCH_04944
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Entry
HCH_04944 CDS
T00307
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hch
Hahella chejuensis
Pathway
hch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HCH_04944 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_04944 (xseA)
Enzymes [BR:
hch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HCH_04944 (xseA)
DNA repair and recombination proteins [BR:
hch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HCH_04944 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABC31633
UniProt:
Q2SCJ1
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Position
5075753..5077087
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AA seq
444 aa
AA seq
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MSELSPHSPFSVTELNRQVRRLLEVSFMQVWVTGEISNFSCPSSGHWYFSLKDDKAQVRC
AMFRNRNMFVKQRPRDGEAVTLRAKVSLYEGRGEFQLIAESMELAGEGELRRAFEELKLK
LSREGLFEESRKRPLPAMPKQVGVITSPTGAAVRDILTVLERRFPAIPVLLFPVPVQGKE
AGPAIVAAIASANRLNCCDVLIVGRGGGSLEDLWAFNEEPVARAIAASAIPVVSAVGHET
DITIADLVADLRAPTPSAAAEKVSPDQAEWKHRFLIYEQRLDAAAQRLLRQEGLRLNQLR
GRLKHPGRRLQESAQRLDDLEVRLHRQAQNLLSVRRNQLTHLRDRLLASSPRQSLKNRYA
TVDALNHRLQTAVLSVLRHKSQHFAKLCGHMEAVSPIATLARGYAIVSDENGQIIRSEKE
VRTGQKVKARLSDGEIHCEVVASV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcagcccccattctcccttctccgtcaccgaattgaaccgccaagtgcgc
cgacttttggaagtcagcttcatgcaggtctgggtgacgggtgaaatttccaacttcagc
tgccccagctcaggacattggtacttctcactaaaggacgacaaagcccaggtgcgttgc
gccatgttccgcaatcgcaatatgtttgtgaagcagcgcccccgggatggcgaggcggtt
actttacgcgcaaaggtcagtctttatgaaggacgcggtgagtttcagttgattgctgag
agcatggaactggcgggggaaggcgaactgcggcgcgcgtttgaggagctgaaactcaag
ctgtctcgtgaagggctatttgaggagagccgcaagcgtccgttaccagccatgcccaag
caagtcggcgtgatcacttctccgaccggcgcggccgtacgcgacattctcactgtattg
gagagacgcttccccgccattccagtgctattatttccggtcccggttcaaggcaaagaa
gccggacccgcgattgtcgccgcgatagcaagcgccaaccggctgaattgctgcgacgta
ttgatcgtcggtcgcggcggcggctcattagaggacttatgggccttcaacgaggagcct
gtggcccgcgccatcgccgcgagcgccattcctgtcgtcagcgccgtcggccatgaaacc
gacatcaccatcgccgatctggtcgccgatctgcgcgcgcctacgccttccgccgccgcg
gaaaaagtaagtccggatcaagctgagtggaaacatcgcttcctgatctacgaacaaagg
ctcgacgccgccgcgcagcgcctgttgcgacaggaagggttgcgacttaatcaactcagg
gggcgactcaaacaccccggccgtcgcctgcaggagtcagcccagcgtctggacgatctg
gaggtgcgtctgcatcggcaggcgcaaaacctgctatccgtccggcgtaatcaattgacg
catctacgtgaccgcctgctggcgtccagtccccggcaatccttaaaaaaccgctacgcc
acggtggacgccctcaatcaccgcttgcagaccgctgtcctgtccgtgttaaggcacaag
tctcagcatttcgccaagctgtgtgggcacatggaggcggtcagccccatcgccaccctg
gcgcgaggatacgccatcgtatccgacgaaaatggccagattattcgcagcgagaaagag
gtgcgcacgggacagaaagtcaaagcccgtctcagcgacggtgaaattcattgtgaagtg
gtcgcctccgtctag
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