Hahella chejuensis: HCH_05390
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Entry
HCH_05390 CDS
T00307
Name
(GenBank) Oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hch03019
]
HCH_05390
03009 Ribosome biogenesis [BR:
hch03009
]
HCH_05390
Messenger RNA biogenesis [BR:
hch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HCH_05390
Ribosome biogenesis [BR:
hch03009
]
Eukaryotic type
Pre-60S particles
RNases
HCH_05390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABC32060
UniProt:
Q2SBB4
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All DBs
Position
complement(5527266..5527814)
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AA seq
182 aa
AA seq
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MSRRDNLIWIDLEMTGLDPDSDRIIEMAVVVTTSNLELVAEGPVIAVHQPDSVLALMDDW
NRNTHGASGLTGRVKGSTIGEADAEKQILDFLAQHVDAGCSPMCGNSIGQDRRFLARYMK
DLEKFFHYRNLDVSTLKELARRWRPEVAAGIKKKGSHQALEDIRESVEELRYYREHFLRL
TD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcgcgataacctgatttggatcgacttggagatgaccggactggacccggac
tcggaccgaattatcgaaatggcggtggttgtcaccactagcaacctggagttggtcgcc
gaaggcccggttatcgcagtgcatcagccagatagcgtattagcgctgatggacgactgg
aatcgcaacacgcatggggccagcggactcacggggcgggtcaagggcagcacaatcgga
gaggctgacgcggagaaacaaatactggattttctggcgcaacatgtggacgcagggtgt
tcccccatgtgcggcaactccattggtcaggaccggcgttttctcgcccgctatatgaag
gatctggagaagttcttccattatcgcaacctggatgtcagtacgctgaaagagctggct
cgtcgctggcggccggaagtggccgcagggatcaagaaaaaaggctcgcatcaggctttg
gaagatatcagggagtctgtggaagagctgcgttactaccgcgaacacttcctgcgttta
acggactga
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