Helicobacter cholecystus: NCTC13205_00778
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Entry
NCTC13205_00778 CDS
T06600
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13205_00778 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcl03400
]
NCTC13205_00778 (nth)
Enzymes [BR:
hcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC13205_00778 (nth)
DNA repair and recombination proteins [BR:
hcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13205_00778 (nth)
Prokaryotic type
NCTC13205_00778 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF2400
Annexin_2
Motif
Other DBs
NCBI-ProteinID:
VEJ24630
UniProt:
A0A3D8IV13
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All DBs
Position
1:828985..829623
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AA seq
212 aa
AA seq
DB search
MTKQEKSQKIKKHFLLAYPNPKTELKYNNLYELLVCVMLSAQCTDKRVNLITPALFASFP
TPMHLAVAPVEDIKELIKSCSFFNNKAKNLSKMAQQVVKDFNGKIPQTQEELKLLAGVGQ
KTANVVLIEYFEQNFMAVDTHVFRVSHRLGLTKAKTALKTEQELVKLFKNDLSVLHQAFV
LFGRYICKASKPQCEQCFVKPYCISTQNFKPQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaggaaaaaagtcaaaaaataaaaaaacactttttgcttgcctaccccaac
ccaaagacagagctcaaatataataatctctatgaactccttgtctgcgtaatgctctca
gcacaatgcacggataaaagagtgaatcttatcacccccgctctttttgcctcttttcct
acaccaatgcacttagcagttgccccagttgaagatattaaagaattgattaaatcttgc
tctttttttaataataaggctaaaaatctctcaaaaatggctcagcaggttgttaaagat
tttaatggcaagattccccaaactcaagaggagcttaaattgctcgcgggtgttgggcaa
aaaacagcaaatgtagttcttatcgagtattttgaacaaaattttatggctgtagataca
catgtttttagagtttcgcatcgacttggcttaacaaaagcaaaaacagcacttaaaacc
gaacaagaattagtaaaattatttaaaaatgatttgagtgtattgcatcaagcttttgta
ctttttggtcgttatatttgcaaggcttctaaaccacagtgtgaacaatgttttgtaaaa
ccatattgtataagtactcaaaactttaaaccccaataa
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