Helicobacter cetorum MIT 99-5656: HCD_05295
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Entry
HCD_05295 CDS
T02033
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm00970
Aminoacyl-tRNA biosynthesis
hcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCD_05295 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hcm03029
]
HCD_05295 (gatB)
Enzymes [BR:
hcm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
HCD_05295 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
HCD_05295 (gatB)
Mitochondrial biogenesis [BR:
hcm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HCD_05295 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AFI06061
UniProt:
I0ESZ2
LinkDB
All DBs
Position
complement(1109976..1111403)
Genome browser
AA seq
475 aa
AA seq
DB search
MQFETIIGLEVHVQLNTKTKIFCACSTSFGEAPNSNTCPVCLGLPGALPVLNKEVVKKAI
QLGTAIEANINQNSVFARKNYFYPDLPKAYQISQFEIPIVSDGQLEIETKQGIKMVRIER
AHMEEDAGKNIHEGSHSLVDLNRACTPLLEIVSKPDMNSPEEAIAYLKKLHAIVRFIGIS
DANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEVERQSIAWENGRY
NEEVVQETRLFDTTKGITISMRDKEESADYRYFREPDLYPVFIDEALLKESKKINELPSA
KKTRYMKDFDVREDDANLLVSEPLLAQYFEDMLNFGAKAKTSVTWLCVELLGRLKAEATL
ENCGITSLMLGTLAKRIDEGKISGKSAKDLLDRLLEQHGGDVDLLIETLGLSQVNDEAEI
LKAIDEVLQNNSDKVAEYKSGKDKLFGFFVGQAMKNLKGANPSVVNTILKEKLNS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaaaccataattggattagaagtccatgtccagctcaatactaaaactaag
attttttgtgcatgttctacaagctttggagaagcccctaatagcaatacttgtcctgta
tgcttaggcttgcctggagctttaccggtattgaataaagaagtggtaaaaaaagccatt
cagctaggcacggctattgaagcaaatattaatcaaaattcagtttttgcacgaaaaaac
tatttttaccctgatttacctaaggcctatcaaatttcgcaatttgaaattcctattgtg
agtgatgggcaactagagattgaaacaaagcagggcatcaaaatggtgcgtattgaaagg
gctcacatggaagaagatgccggtaagaatatccatgaaggtagccattctttagtggat
ttgaatcgtgcttgcaccccgctattagaaattgtaagtaaacctgatatgaatagccct
gaagaagccatagcgtatttgaaaaaacttcatgccatagtgcgttttattggcatttct
gatgcgaacatgcaagaagggaatttcagatgcgatgcgaatgtgtctattagaccaaag
ggtgatgaaaagctttatactagagtagaaattaaaaatctcaatagttttagatttatt
gctaaagcgattgaatatgaagtagaacgccaaagtattgcatgggagaatgggcgttat
aatgaagaagtggttcaagaaacacgcctttttgataccacaaaaggaataactatttct
atgcgtgataaagaagagtccgctgattaccgctattttagagagcctgatttatatcct
gtttttattgatgaagcccttttaaaagaaagcaaaaagattaatgaattgcctagtgct
aaaaaaactcgctacatgaaggactttgatgttagagaagatgatgcaaatttattagtg
agtgagcctttgttagcacaatattttgaagatatgctcaattttggggctaaggctaaa
acaagcgtaacatggctttgtgtagagctattagggcgtttgaaagctgaagctacctta
gaaaattgtgggattacttctttaatgctaggcactttggctaagcgcattgatgaaggc
aagatttcaggcaagagtgctaaagatttgctagataggttgctagaacaacatgggggc
gatgtggacttgcttattgagacattaggcttgtctcaagtcaatgatgaagcagagatt
ttaaaagccatagatgaagtgcttcaaaacaatagcgataaggtcgctgaatacaaaagc
ggtaaggataaactctttggattttttgtaggacaagccatgaaaaatctcaagggggct
aatcctagcgtcgtgaatactattttgaaagagaaattaaattcatga
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