Halomonas chromatireducens: LOKO_01867
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Entry
LOKO_01867 CDS
T04292
Symbol
uvrB_2
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hco
Halomonas chromatireducens
Pathway
hco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOKO_01867 (uvrB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_01867 (uvrB_2)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOKO_01867 (uvrB_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOKO_01867 (uvrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
ResIII
Helicase_C
DEAD
AAA_30
Lipocalin_9
AAA_22
DUF87
UB2H
SWI2_SNF2
Kinesin
AAA_5
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AMD00935
UniProt:
A0A0X8HEB5
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All DBs
Position
1978750..1980492
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AA seq
580 aa
AA seq
DB search
MSKPFRLQSNFQPAGDQPAAIESLISGLESGLTHQTLLGVTGSGKTFTMANVVQRLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAIEYFVSYYDYYQPEAYVPSSDTFIEKDASINEHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPEQYLKMRLHFTRGELIHQRDFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIYPADSDEEAVRVELFDDEIDSISLFDPLTGEVRGKVPR
MTIYPKSHYVTPRETIVAAADRIKEELVERLEWLRKHDKLVEAQRLEQRTLYDLEMMNEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPADALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWERISPQTIFVSATPGPYEAAHAGQLVEQVVRPTGLLDP
ELEVRPATTQVDDLLSEIRLRTNVGERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGDRHVAANTEVYTVPPVGEVGEGNDALVGDPQHFVEHPVDGEPTALA
PDEIDMTPLETRRVAGRDGPTHWRLAIPRRRNQPCRTSVP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccctttcgccttcagtcgaatttccagccggccggtgaccagccggcggcc
atcgaaagccttatcagtgggctggagtcgggcctgactcaccagaccctgctgggggtg
accggatcggggaagaccttcaccatggccaacgtggtccagcggctgcagcgtccgacc
attgtcatggcccccaacaagaccctcgcggcccagctctatggcgagttcaagtcgttc
tttcccgacaatgccattgagtatttcgtttcctactacgactactaccagcctgaagcc
tacgtaccgtcgtcggataccttcatcgaaaaggacgcctcgatcaacgagcatatcgag
cagatgcgcctgtctgccaccaaggcgctgctggagcggcgcgatgccttgatcgtagtc
tcggtatccgcaatttatggtctgggtgatccggagcagtacctaaaaatgcggttgcac
ttcactcgcggcgagctgattcaccagcgtgacttcctgcgccgacttgccgagctgcag
tacacccgcaacgacatggattttcgtcgtggcacctaccgcgtgcgcggcgatgtcatc
gatatctacccggccgactccgacgaagaagcagtgcgcgtggagctattcgacgacgag
atcgactccatcagcctgttcgatccgctgaccggagaagtgcgtgggaaagtgccgcgc
atgaccatctaccccaagagccactatgtgacgccgcgagagaccattgtggcggcagcg
gaccggatcaaggaggagcttgtcgagcggctggaatggctgcgcaagcatgacaagctg
gttgaagcacagcgattggagcagcgtacgctctacgacctggaaatgatgaatgagcta
ggttactgcaacggcatagagaactactcgcgttacctgtccggacgtgcgccgggcgag
ccaccacccaccttcttcgattacctgccggcggacgcgctgctgttcatcgatgaatcc
cacgtcagcgttccccaggtcggcggcatgtacaagggtgaccgctcacgcaaggagacg
ctggtagagtacggcttccgcctgccgtcggcgctggacaatcgccccatgaagttcgag
gagtgggagcgcatctctccccagaccatctttgtttcggccacccctgggccctacgag
gcggcacacgccggccagctcgtggagcaggtggtgcgccccaccgggttgctcgaccct
gagcttgaggttcgcccggcgacgacccaggtggatgacctgctctccgagatacgcttg
cgcacaaatgtcggcgagcgggtgctggtcaccacgctgaccaagcggatggcggaagac
ctgacggagtacctcgacgagcatgacgtgcgcgtgcgctacctgcactccgatatcgac
accgtggagcgggtcgagatcattcgtgacctacgtcttggagaccggcatgtagccgcg
aataccgaggtgtacacggtgccgccagtaggcgaagttggggaaggtaatgatgcactc
gtcggcgacccgcagcatttcgtcgagcatccggtcgacggcgagcccaccgcgctggcc
ccggacgagatcgacatgacgccgctggaaacccgccgcgtggcggggcgcgacgggccg
acccactggcgcctggcaatcccccgtcggaggaaccaaccctgtcgcacatcggtcccc
tga
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