KEGG   Helicobacter cinaedi PAGU611: HCN_1356
Entry
HCN_1356          CDS       T02034                                 
Name
(GenBank) type III restriction-modification system restriction subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hcp  Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:hcp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcp02048]
    HCN_1356
Enzymes [BR:hcp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     HCN_1356
Prokaryotic defense system [BR:hcp02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   HCN_1356
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH AAA_22 YqaJ ANAPC5
Other DBs
NCBI-ProteinID: BAM15056
UniProt: A0A809NQ68
LinkDB
Position
complement(1356116..1359094)
AA seq 992 aa
MGFSYERNLPHQSKAIDCVLLALKGASVEASLNKSFNPKISINDLNLSANLRELQKRENI
NSLHTLTRVFDICMETGTGKTYTYTKMALELCKEFGLRKFIIIVPSLAIKANTLNFLQAV
ATREHFKSEFELEIIANAIEAKKQAGKKGRKLMPNGLRDFIENDNPKEVHFLIINAQMLT
ATSMNEDYEQNLCDEFSNPYDALNAVNAVCIVDEPHRFDETNKAWAKIVNKTEKAINPQM
IFRYGATFKEDGRGNKYHNLIYQLNAISAFNDNLVKGVEISVCEAQGSEKHKWVEFSGIE
NNQAKFELKEQGKSGALRQVSLNAGESLGVIDENLAHLCVEIKTKKTNAITKFKLNNQDD
NNELKKGDRINLNAYLPQMQTQMLQTALKKHFELEKRLMQSQTKIKPLTLFFIEDIESYR
SDDATREFLRIEFEKIAENLMRENLKEASGFYKEYLEKSLRDLRGISGGYFSKDNSNKEE
YVVSEINEILHDKEKLLSCENIRRFIFSKWTLREGWDNPNVFVICKLRSSGSEISKLQEV
GRGLRLPVNEYMSRVGNDGDFGAHYLHYIVNDSERDFAQSLISDINAQSGVIFSENAKTL
DEKMRQKICEVYEIAEFDLLSELVSSGIVDKKFDFLENGMLRLKELYPNAFDKESLQKDK
VRQSGKTQTKAHIRRDNYKILRELWETINQKVILEYKIKSEGEFSALLESFLREFMQKNQ
AVQSNITTTTKRLEMRDNSASLQEILRQENALDSKSMQYQAMGKSEFLQQSANALLVNVG
TLREVLESVGFESQFFNARNIALLKSEFNRFLFENAISGFEVGFAKISSATQPNLHPTAF
TDTNGKPYEAIESSNLGIESSDEITPKNYLFDELFYDSAIERENILQNVDRVLVFTKIPK
NALKIPVAGGISYTPDFAYVLKCENGEQIYCIIESKGKDLRDLSKVENLKISRAEQFLEK
SGIFGAKIQFRAQFESEAITKILQEFLNKNDI
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgggatttagttatgagagaaatttgccacaccaaagcaaggcgatagattgtgttttg
ttagccttaaaaggtgcgagcgtagaagcaagtttaaacaaaagttttaacccaaagata
agcattaacgacttaaatttaagcgcaaatttaagagagttgcaaaaacgagagaatata
aattctttgcacacgcttacaagggtgtttgatatatgtatggagacagggacgggaaaa
acttacacctacactaaaatggcattagagttgtgtaaggaatttgggttgcgaaaattt
atcatcatcgtcccaagcctagccataaaagccaacacgcttaactttttacaagccgtt
gccacaagagagcattttaaaagtgaatttgagcttgaaatcatcgctaatgcaatcgaa
gctaaaaaacaagctggcaaaaaaggcagaaagctaatgccaaatgggttgcgtgatttt
atagaaaatgacaatccaaaagaggtgcattttttaatcataaacgcccaaatgcttacg
gcgacttcgatgaatgaggattatgaacaaaacttgtgtgatgaatttagcaatccttat
gacgcgcttaatgcggtaaatgccgtgtgcattgtagatgagccgcataggtttgatgaa
acaaataaggcgtgggcgaagattgtaaataaaacagaaaaagccataaatccgcagatg
atttttcgctatggcgcgacatttaaagaggacggacgaggaaataaatatcacaatctt
atctaccaactcaacgccattagtgcgtttaatgacaatctcgtcaaaggcgtggaaatc
agtgtctgcgaagcacaaggtagcgaaaagcacaaatgggtagaatttagcggcatagaa
aacaatcaagccaaatttgaactcaaagagcagggcaaaagcggagcgcttaggcaagtg
agcttaaatgctggtgagagtttgggcgtgatagatgaaaatttagcgcatttgtgcgtg
gagataaaaaccaaaaaaacaaacgcaatcacaaaatttaaactcaacaatcaagacgat
aacaacgagctaaaaaagggcgataggattaacctaaatgcgtatttgccacaaatgcaa
acgcaaatgctacaaactgcgcttaaaaagcactttgagttagaaaaaaggctaatgcaa
agccaaacgaaaatcaaacctttaacgctgtttttcatcgaggatattgaaagttaccgc
agtgatgacgctacaagggagtttttgcgaatcgagtttgaaaaaatcgccgagaattta
atgcgtgagaacttaaaagaggcgagtgggttttataaggagtatttagaaaagtcattg
cgtgatttgcgaggcattagcggcgggtatttttccaaagataactcaaataaagaagag
tatgtcgtaagtgagataaatgaaattttacacgacaaagaaaagctgttaagctgcgag
aatataaggcgttttatcttttctaaatggactttgcgtgagggctgggacaatccaaat
gtctttgtgatatgcaagctgcgttctagcggaagcgagataagcaaactccaagaggtt
gggcgtgggcttaggctgcctgtgaatgaatatatgtcgcgcgtggggaatgatggtgat
tttggggcgcattatttgcattatatagtcaatgatagtgagcgagactttgcacaaagc
cttataagcgatataaacgctcaaagtggcgtgatatttagcgagaatgctaaaacgcta
gatgaaaaaatgaggcaaaaaatctgcgaagtgtatgaaatagccgagtttgacttgcta
agcgaattagtgtcaagtgggattgtcgataaaaagtttgattttttagaaaatggtatg
ttgaggctaaaagaactttatccaaacgcctttgacaaagaaagcttacaaaaagacaag
gtgcgacaaagtggcaaaacacaaacaaaggcacatatccgccgtgataattacaaaatc
ttacgagaactttgggagactatcaaccaaaaggtgattttagagtataaaatcaaaagc
gagggagaatttagcgcattgcttgaatcgtttttgcgtgaatttatgcaaaaaaatcaa
gccgtgcaatcaaatatcaccacgacaaccaaacgactagaaatgagggacaatagcgcg
agtttgcaagaaattttgcgacaagaaaatgctcttgatagcaaaagtatgcaatatcaa
gcaatgggtaagagcgagtttttacagcagagcgcaaacgcacttttagtaaatgtgggg
acattacgcgaagtgctagaatctgtgggctttgaatcgcaattttttaatgcacgaaat
attgctttgctaaaaagtgaatttaatagatttttgtttgaaaatgcgataagcggcttt
gaagtgggctttgctaaaatctctagtgcgacacagccaaacttgcaccctacggctttc
acagatacaaatggcaaaccctatgaggcgatagaatcaagcaatttagggatagaatct
agcgatgaaatcacgccaaaaaattatctttttgatgagttgttttatgattctgctatt
gagagagaaaatatcttacaaaatgttgatagagttttggttttcaccaagattcctaaa
aatgcgttaaaaatccctgtggcaggtgggataagctacacaccagattttgcttatgtt
ttgaagtgcgaaaatggcgagcagatatattgcataattgagagcaagggcaaagatttg
cgtgatttaagcaaggtagaaaatctaaaaatatctcgcgccgagcagtttttggaaaaa
agtgggatttttggcgcaaagatacaatttagggcgcaatttgaaagcgaagcaatcaca
aagattttgcaagaatttttaaataaaaatgatatttaa

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