Hippocampus comes (tiger tail seahorse): 109511168
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Entry
109511168 CDS
T04969
Symbol
pcm1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109511168 (pcm1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcq03037
]
109511168 (pcm1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
109511168 (pcm1)
Cilium and associated proteins [BR:
hcq03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109511168 (pcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCM1_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
109511168
NCBI-ProteinID:
XP_019717561
LinkDB
All DBs
Position
Unknown
AA seq
2076 aa
AA seq
DB search
MATGGAPFDDSADELHNWSVTNASLEDRLNNMDWSGAQQKKANRSSDKNKKKLSAALVAE
GRLTNDISPSSTPWSGRRRPAHMKYTSQLSVPDQAELDKIQQRIHFSDLDESIGSDSQGR
VTAANNQRQLAAENKKPYNFVPLHINTNKNKELLLLPPATSTPSTPVAIKETKKQSAAVR
DAFTPGAPTKEAAARPIRGSAERGAGAAANPDYEEGQDSVVSSLLVSKLVQIREYIGKAS
SMRDDLVEKNDVPANVERLSHLIEHLKEQEKSYLRFLQKMLARKNEEDDGRTQDSAMGSG
SLVESTSLNVDVRPPDASNAPGDWPNASMRDQNEELENFRKQHLLLKKMLEQQDQLRALQ
GRQEALLAMQQSAEQALAVIEDAAVVTETTGSVSGLSITSELNDELNDLIQRFHNQLRDS
RTKSVPDNRRQAESLSLSREVSWSRAPGALGPPQHRPVLHSASGPHGGLDGGGTTAASAK
LTKLQELQDKKETMDKILDELHSLRDQTLNNNYCGALSTQRSLSTGGSSDCPSASCSTGA
AAAASFHPLLPQHADTDNSNDKLRKLKEVHKRLNELRELVQYFQQTSDMMVDAVNENVKE
DEEEEDDEGEEDEEEVTEDSSMLEAMFDYEQENRQPPTNIRNPQRSANWGDSNSLANRCS
VSSSATTNANNRDSRLNSEINNRSAVNLRSFHIPSAIECQYNRDTAYNWAKDEDGLNNDG
GGAGAQPGCPDDEASGSGSGSSLASEAGFSQELRQQKAEQKLRRLQELVAMVQSDDTDTT
ANEDETLHQQQNNTRVTMGGPPPAAGPQQDPRGSDAALYRKAREKIYKEKLRQQKQALEQ
LHEERQMLGEIQGKIQDLQLTCPDLQSSLSSQASEQGLIWKVPAAASTPAVAQPSSSSSA
AKGSPTVLNPTTPEAAATSVPDNEQLWSEMRRHQVAREELRQRRKHLESLMAEHQRRRGL
AGSLCGADEQAAPSQLAASRDERTMATWGSTPCNLDEEEDGDYRSERSAEEEDRSESSSA
DDGSIFPTSMTQPLYKKNNQECSPKPPPAFSSVHESPHVKPKTKQPQPPPPRSWNPSASQ
PANGRRQENLCWASEVSVAEGSTHWQEQISQLQRQLDFSTNMCQTLLQDQQMLSYMLQSV
MAGSYGALPNNLTSPQVHLVMHQLNQCYTQLAWQQTNVQRLKQVLNELLQQQQQEPQQQK
QQHPHQPSPSAAGFSLFPLFPAAMSHFPPGAASAHHESPEQQKRHSDPNTSIKTESMTFP
PPLQRSPLNVMADRRPAGRSNNSFPNNSSVHHPPPTGERRPSFSPPSFTPPQRRHSPRNE
CERASEASFSSLPDRADPTTVTKTFKTGRKASAQANLASRSKSRRKRGKGHNKNNEGLES
DSLSSTADFDQERAASSRHHDQHLLDKLTQEKLDSKSKLGNRQDDISSAYAWRTPFLSNR
IACTEAADASSDFSLFEALRETIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRA
LYSLQDLVSRHLAEKSASQEMPPLGAASWAGGSQSELTPSESSTASDVELVGKNLKKRDD
IESVGNDSTLSSTTLDPFSKDDLGNTVIHLDKALARMRQYERMKHKVDASTAADSDLRDV
EAAAAAASAVAPPEAADAGGAAFGDVHSPQIDTSQLNRQIKEIMSEVIPFLKEKMHEACT
PQLLTSLRRQVLALTRQNDDSKEFVRFFHRQLGAILQDSLSRFIGQTLKDCGEDLLVEVS
DILFNELAFFRLMQDLDHGIAASPEAGHIAEKAERPPDADQTLKGSAALEVNASASPDED
TDRDETKQKVPSLLPTDTKSYDEDEDGEEADGQAMPPSIRLSKAESQALNNYGSGEDEND
DDDGREPDEFEAAPVDVLTSLQVTAEGPAEPQAQSAEETKESDLEPANGDGVESGKLPVP
ASTEDEPAETASYHSDKEEDPDGVIAAAASEENIKSAEVHAALKDSNTTSTPDTESPVMI
SVDMTARREPINCSVIGLQEAVSGNSSQRTSDEDDFVRVDDLPLQLPVTSQEALQKRIVD
EQQTNDLRVEILSGNAETPPGLVGNGGHLKEPESSE
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggaggtgcacctttcgacgacagcgcggacgagctgcacaactggagcgtc
accaacgccagcctggaggacagactcaacaacatggactggagtggcgcgcagcagaaa
aaggcaaaccgctcgtcggacaaaaacaaaaaaaagctgtcggctgctttggtggcggaa
ggccgcctgaccaacgacatttcgcccagttctaccccctggagcggccgacgtaggcca
gcgcacatgaaatacaccagtcagctgtcagttccggaccaggcggagctggacaagatc
cagcaaaggatccacttctccgatttggatgagagcatcggtagtgattcccagggccgc
gtgacggccgccaacaaccagcggcagctcgcggcggagaacaagaaaccttacaacttt
gtcccgctgcacatcaacaccaacaagaacaaggagctgctgctgctcccacccgccacc
tctaccccttccacgcccgtcgccatcaaggaaaccaagaagcagagcgcggcagtgagg
gacgccttcactcccggagctcccactaaggaagcggccgcgaggccaatacgtggcagc
gccgaaagaggggcgggtgcggcggcaaacccagactatgaggaaggacaagacagcgtt
gtcagcagcctgttggtcagcaagctggtgcagatccgcgagtacatcggcaaggccagc
tccatgcgcgacgacctggtggagaaaaacgatgtgccggccaacgtggagcgcctctcg
catctcattgagcacctcaaagagcaggagaagtcctacctgcggttcctgcagaaaatg
ctggctcggaagaacgaggaggacgacggcaggacgcaagattctgccatgggttccggc
tccttggtcgagagcacctcgctgaacgtcgacgtgagacctccggacgcatcgaatgcg
ccaggcgactggccaaacgcatccatgcgagaccagaatgaggaactggagaacttccgg
aagcagcacctgctgctgaagaaaatgctggagcagcaggatcagcttagggccctgcag
ggccgccaagaggccctgctggccatgcagcaaagcgccgagcaagcgctcgcagtcatc
gaggacgcggcggttgtcacggaaaccacgggcagcgtgtccgggctgagcatcacgtcg
gagctcaacgacgagctcaatgatttgatccagcgcttccacaaccaactgcgggactcc
cggaccaagtccgtgccggacaaccgtcgtcaagcagagagcctctccctctccagagaa
gtgagctggtcccgtgcccccggggcgctcggcccgcctcagcacaggcccgtactgcac
tcggcctccgggccccacggcggcctcgatggcggggggacgacggccgcaagtgccaag
ctcaccaagctccaggagctccaagacaagaaagaaaccatggacaagatcttagacgaa
ctgcactcgctccgagaccagacgctcaacaacaactactgcggcgcgttgtcaacgcag
cgcagcttgagcacgggcggctcttcggattgtccgtctgccagctgctcaactggagcc
gcggctgccgcatcctttcatccgttgctcccgcaacacgcagacaccgacaactcgaac
gacaaactcagaaagctgaaggaggtccacaagcgcctgaacgagcttcgggaattagtg
cagtactttcagcagacgtcagacatgatggtggacgcggttaatgaaaatgtgaaagag
gacgaggaggaggaggatgacgagggggaggaggacgaggaggaggtgacggaggacagc
tccatgctggaggccatgtttgattatgagcaagagaatcgccagccacccacgaacatt
aggaacccgcagcgcagtgcaaactggggcgactcgaacagcctcgcgaaccgctgcagc
gtctcaagtagcgccacgaccaacgccaacaatcgcgacagtcgactcaacagtgagatc
aacaaccggtcagcggtcaacctccgcagctttcatatcccctcagccattgagtgccag
tacaacagggacacggcctacaattgggcgaaggatgaggacgggctcaataatgacggc
ggaggcgccggtgcccaacccggttgtccggacgacgaggcgtcgggctccgggtcgggc
agcagcctggccagtgaagctggcttctcccaggagcttcgccagcagaaagccgagcag
aagctacgccggctgcaggagctggttgccatggtccagagcgacgacacggacacaaca
gccaacgaggacgaaactttgcaccaacagcagaataacactcgagtgactatgggggga
ccaccgccagccgccggaccccaacaggatccccggggatcagacgccgctctctacagg
aaggccagggaaaagatctacaaagagaagcttcgtcagcagaagcaggcactcgagcag
ctccacgaggagcgtcagatgctcggtgagatccagggcaagatccaggacctccagttg
acgtgtcctgacctgcagtcctcactgtccagccaagcgagcgagcagggtttaatctgg
aaggttccagcagcagcgtcgacaccagctgtcgcacagccttcctcctcatcgtcggcg
gcaaaaggcagcccgaccgtgctcaatcccaccactcccgaagccgccgcgacttcggtc
cccgacaacgagcagctgtggtcagagatgcgtcgccaccaggtggcgcgggaggagctg
cggcagcggcgcaagcacctggagtccctgatggccgaacaccagaggcgccgcggcctc
gccggctcactctgtggcgctgacgagcaagcggctccctcccagctcgccgctagtcgg
gacgaaaggacaatggccacctggggctccaccccctgcaacctggacgaggaggaagat
ggcgactatcgctctgagcgcagcgcggaggaagaggaccgctcggagagcagctctgcg
gacgacggcagcatcttccccaccagcatgactcagcccctctacaagaagaacaaccaa
gaatgtagccccaagcctccaccagccttttcctccgtgcacgaatcccctcatgtcaaa
ccgaagaccaagcagccacagccgccaccccccagaagttggaacccgtccgcgagtcag
cctgcaaacggcagacgtcaggagaacctttgctgggcctctgaggtctcggtggccgag
ggctccacccactggcaggagcagatcagccagctgcagaggcagctggacttcagcacc
aacatgtgtcagactctgctgcaggatcaacagatgctgtcatacatgctgcaaagcgtg
atggcgggctcgtacggcgccttgcccaacaacctgacatccccgcaggtccacctggtc
atgcaccagctcaaccagtgttacacgcagctggcttggcagcaaaccaacgtgcaaaga
ctgaagcaggtcctgaatgagctcctgcagcagcagcagcaggagccacaacagcaaaaa
cagcaacacccccaccagccgtcgccttcagctgcaggatttagcctgtttcctctcttc
cctgccgccatgagccacttccctccgggtgcggcgagtgctcatcacgagagtccggag
cagcagaagcggcactcggaccccaacacctccatcaaaactgagtccatgactttccct
cctccgctccagcgctcaccccttaatgtcatggctgacagacggcccgcgggccggtcc
aacaattccttccctaacaacagtagcgtgcaccatccgcctccgacgggggagcgccgc
ccgtccttctcccctccctcgttcaccccaccgcagcggcgccacagccctcggaacgag
tgcgagcgggcgtcggaggccagttttagcagcttgcccgaccgcgctgatcccaccacc
gtcaccaagaccttcaaaacggggcgaaaggcctccgcccaggctaacctggcctcccgc
agcaaaagccgacgcaagcggggcaaaggacacaacaagaacaacgaaggtctggagagc
gacagcctgagcagcacggcggactttgaccaagagagggcagcgtcttctcgccaccac
gaccagcacctgctggacaaactcacgcaggagaaactcgacagcaaaagcaaactgggc
aacagacaggatgacatttcctctgcctatgcttggagaacacccttcctctctaacaga
attgcatgcacagaagcagcagacgcgagcagcgacttctcgttgttcgaggcgctcagg
gagaccatctactccgaggtggccacgctgatctcccagaatgagtcgcggcctcacttt
ctcatcgagctcttccacgagctgcagctgctcaacacggactacctgaggcagagggcg
ctctattccctgcaggacttggtgagcagacacctggcagagaagagcgcctcccaggag
atgcctccgctgggcgccgcgtcctgggccgggggctcgcaatctgagctgacgcccagc
gagagctccaccgccagcgatgtggaattggtggggaagaacttaaagaagagagatgac
atcgagtccgtggggaatgacagcaccttgtcgtcgaccaccctggatccgttttccaag
gatgatctgggcaacacggtgatccacttggacaaagctttggcccggatgcgccaatac
gagcgcatgaagcacaaagtggacgcgagcaccgccgcggactcggacctccgtgatgtc
gaagccgccgctgccgcagcctccgccgttgctcccccagaagccgcggacgcaggcggc
gccgcctttggtgacgtgcactcccctcagatcgacacctcgcagctcaaccggcaaatc
aaggagatcatgagcgaagttattcctttcctcaaggagaagatgcacgaggcgtgcacg
ccgcagctgctgaccagtttgcgccgccaagtcctggcgctcacgcggcagaacgacgac
agcaaagagtttgtgcgcttcttccaccggcagctcggggccatcctgcaggattccctg
agccgcttcattggccaaaccctgaaggactgcggcgaggacctgctggtggaggtctcg
gacatcctcttcaacgagctggcctttttccgactcatgcaggatttggaccacggcatc
gccgcctccccggaagccggacacatcgcggagaaggccgaacgtcctcctgatgccgat
caaactttgaagggcagcgcagcactcgaagtgaatgcctcagcctcccccgacgaagac
acggatcgagacgaaaccaagcagaaggttccttctctcttgccgactgacacgaaaagc
tacgatgaagatgaagatggcgaagaggctgatgggcaggcgatgccgccatccatcagg
ctctccaaagcagagagccaggcgctgaacaactacggcagtggcgaggacgagaacgac
gacgacgacgggcgggagccggacgagtttgaggcggcccccgtggacgtgctgacgtcc
ctgcaggtcacggcggagggcccggcggagccacaggctcaatcggctgaggaaacaaaa
gaaagtgacttggagccggccaacggcgacggcgtcgagagcggcaagttgccagttccg
gcttcgactgaagacgaacccgccgagacggcgagttaccactccgataaagaggaggac
ccggacggcgtcatcgccgccgccgcttcagaggagaacatcaaaagcgccgaagttcac
gcggcccttaaagactcaaacaccaccagcacccccgacacggaatcccccgtcatgatc
agcgtcgacatgacagcgcgacgagagccaatcaactgttctgtcattggattgcaggaa
gccgtctcgggcaacagtagccagaggacgtcggacgaggacgattttgtccgggtggac
gatcttccgttgcagctgcccgtcaccagccaggaggcgctgcagaaaaggatcgtggat
gagcagcagaccaacgacctgcgcgtggaaatcctcagtggcaacgcggaaacgccgccg
gggcttgtgggaaatggcggccacctgaaggaaccagaatcttccgaatga
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integrated database retrieval system