Hippocampus comes (tiger tail seahorse): 109512791 Help Entry 109512791         CDS       T04969                                  Symbol col6a1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism hcq  Hippocampus comes (tiger tail seahorse) Pathway hcq04510   Focal adhesion hcq04512   ECM-receptor interaction hcq04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:hcq00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109512791 (col6a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     109512791 (col6a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     109512791 (col6a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hcq04147]     109512791 (col6a1)    00536 Glycosaminoglycan binding proteins [BR:hcq00536]     109512791 (col6a1) Exosome [BR:hcq04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    109512791 (col6a1) Glycosaminoglycan binding proteins [BR:hcq00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109512791 (col6a1)  Hyaluronan   Extracellular matrix or blood plasma proteins    109512791 (col6a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 DUF1194 Motif Other DBs NCBI-GeneID:  109512791 NCBI-ProteinID:  XP_019720350 LinkDB All DBs Position Unknown AA seq 1009 aa AA seqDB search METLRGLLVLLCVLLAGAQTQIQRPRSAECPVDLFFVLDTSESVALRQKPPNFYIDQIKE FTKRFIDELQDMRHRCDRYLTWNSGALHYSDDVILVRELSDMSTDRQALKNDIDTIRYIG KGTYTDCAIKRGLAELLIAGSHYHENKYIVVVTDGHPITGYKEPCGGVQEAANEARLHGV KVFAVAISPDQEDTRLSIIATDQNYRQNFTAADDSRATKMGTIRTIIDMITNETKDVCCS FDCNAPGGPKGPDGDAGGMGETGRPGMPGEKGDIGAMGSVGDPGPVGYSGMKGDRGGRGV KGERGHKGYKGDKGLRGNDGIDGRKGEAGFPGLSGCKGSPGSDGLQGEPGPKGDPGPFGP KGEKGDSGRDGEPGRPGNYGPLGPQGDRGPRGANGDKGERGDDGAPGPDGPRGEIGAVGE KGEQGSRGNRGPRGEPGEPGPRGEQGREGSAGPNGDPGEPGRDCSPGYRGDEGPPGPEGP KGPRGIKGSAGDRGPMGGRGVDGVPGNGTAGCPGFQGYPGPRGDAGEPGSKGTPGPKGDD GEAGDPGPDNSQPGPPGSKGAKGHRGPEGNAGPPGPPGPPGTDECEILDIIMKLCSCCEC KCAALDLAFIVDSSESIGSTNFALAKDFIITVVDRLIKDQQVKFAGNESRVSVVQYSGAK AQEVVQLGTNVATLTEFKQAVKDLNWLAEATYTGEALNFALENTIKLMRQENRVVLVLTD GRSDILRDRVPLNVLCGKNIRVGGLGVKDYSGRQPNQEQLGDLVCKSDPKPGFSFVLDNF AELLDDSFLQNLTSRICQDKKCPDYKCPISFSQSHDILLMMDSSASVGQKNFDTSKTFVH RLVDRFLSAQKERGVNVRVAVGQYSRGARMEQGLTTNATLLSHRINEMAFQNDGTNVLEA MDFAIKSLPSRGDASGDRKKVILFSDGRSQAVTEAVLEKRVRELADAGLELFVIAVGSQV NEVNLRTLVSRGQRGDINYAQRHLFRVADYPSLLRGVFHQTVSRRVSMP NT seq 3030 nt NT seq  +upstreamnt  +downstreamnt atggagactttgagagggctccttgtgctgctgtgcgtcctcctggccggagcgcaaacg cagatccaaagacccaggtccgcggaatgtccggttgaccttttcttcgtattggataca tctgagagtgtggccctccggcagaagcctcccaacttttacattgaccagatcaaagaa ttcaccaaacgcttcatcgatgaactgcaggacatgcgccatcgatgcgatcgctacctg acatggaactctggggcgctgcactacagtgacgacgtcatcctggtgcgcgaactgagt gacatgagcaccgatcggcaggccctgaagaatgacattgacaccatcagatacatcggc aaagggacctacacggactgcgccatcaagaggggtcttgctgagctgctcattgcaggt tctcactaccatgagaacaagtacatcgtggtggtgactgacggccatcccattaccggc tacaaggagccatgcggaggtgtgcaggaggctgcaaatgaagctaggctacatggcgtc aaggtgttcgccgtcgccatctcacctgatcaggaggatactcgactatccatcatcgcc actgaccagaactacaggcagaacttcacagccgcagatgactccagagccaccaagatg ggaaccatccgaaccatcatcgatatgatcacaaatgagaccaaggacgtgtgctgctca tttgactgcaatgctccaggaggccctaaaggaccagatggagacgctggcggcatggga gaaacgggcagacccggaatgccaggagagaaaggagacatcggcgcaatgggcagcgtt ggagatcccggtcctgttggatacagcggaatgaagggagaccgaggtggtcgaggcgtg aagggagaaaggggacacaaaggctacaagggtgacaaaggtctacggggaaatgatgga atcgatggacgcaagggtgaggctggtttccccggcctttctggctgcaaaggatctcct ggatcagatggtctacagggtgagcctgggccaaagggagaccctggtccttttgggcct aaaggagaaaaaggagatagtggaagagatggcgaaccgggaagacctggaaactatggg cctttaggacctcagggcgatcgcggacctcgtggagctaacggggacaaaggcgagcgc ggtgatgatggcgcgccgggaccggacggacctcgtggcgagatcggagcagttggagag aagggggagcaaggttcccgtggcaaccgaggaccaagaggagagccaggggagccagga ccccgtggagagcagggacgagagggctcggctggccccaacggagaccccggtgagcct ggcagggattgttcccccggatacagaggtgatgaaggcccccctggaccagagggaccc aaaggaccaagaggaatcaaagggtctgccggagacagaggcccaatgggaggcaggggt gtggacggcgtaccaggaaatggtactgcaggttgcccaggcttccagggttatcctggc cctcgcggagatgctggtgaacctggcagcaaaggaacccccggacccaaaggagatgac ggagaagccggtgacccgggccctgataacagtcagccaggacctccaggatcaaaaggg gccaaaggtcacaggggacctgaaggaaatgcgggacctcctgggcctcccggaccacca ggaactgatgaatgtgaaattctggatatcatcatgaagctgtgctcttgttgcgaatgt aaatgcgccgctctggatttggcgttcattgtggacagctccgagagtattggttccaca aactttgctctcgccaaggacttcatcatcaccgttgtagacagattgattaaagaccag caggtcaagtttgcaggtaatgagtccagggtgagcgttgtgcagtacagtggcgcaaaa gcccaagaagtggtccaactgggcaccaacgttgctaccctcaccgagtttaaacaggcc gtgaaagacctcaactggctggctgaggccacttacaccggcgaggccctgaatttcgct ctggaaaacaccatcaagctgatgaggcaggagaaccgcgtggttctggttctcaccgac ggacgctctgacattctcagggacagggttcctctcaatgttctctgcggcaaaaacatc agggtgggaggtttgggcgtgaaggactactcgggccgtcagcccaatcaggagcagctt ggagatctggtgtgcaagagtgatcccaagccaggattttccttcgtcctggacaacttt gccgagcttctcgatgactccttcttgcagaacctcacatccagaatctgccaagataag aagtgcccggactacaagtgcccaatctccttctctcaaagtcacgacatcctgctgatg atggacagctcagctagtgtgggccagaagaactttgacacaagtaaaaccttcgtacac cgtttggtcgatcgcttcctgagcgcccagaaggagaggggcgtgaacgtgcgagtggcc gtcggccagtacagccgcggcgcccgcatggagcaaggcctgaccacaaacgcgaccctg ctgtcccatcgtatcaacgagatggcgttccagaacgacggcaccaacgtcttagaggcc atggactttgccatcaagtcgctcccgagccgcggcgacgccagcggcgacaggaagaag gtgatcctgttctcagacggaaggtctcaggccgtcaccgaggccgtgctggagaagcgc gtccgcgagctggcggacgccgggttggagctcttcgtcatcgcggtgggcagccaagtc aacgaggtcaacctgcgtacgctggtgagcaggggacagcgtggcgacatcaactacgct cagcgccacctcttccgcgtggcagactacccgtcgctgctccgcggagtcttccaccaa accgtctcccgaagagtgtccatgccctga

DBGET integrated database retrieval system