KEGG   Hippocampus comes (tiger tail seahorse): 109512943
Entry
109512943         CDS       T04969                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hcq01009]
    109512943 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hcq03036]
    109512943 (kdm5c)
Enzymes [BR:hcq01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     109512943 (kdm5c)
Protein phosphatases and associated proteins [BR:hcq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109512943 (kdm5c)
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109512943 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD DDE_Tnp_IS66
Other DBs
NCBI-GeneID: 109512943
NCBI-ProteinID: XP_019720620
LinkDB
Position
Unknown
AA seq 1602 aa
MEGDEFVAPPECPVFEPSWEEFKDPLGYIAKIRPIAEKSGICKIRPPSDWQPPFSVELDT
FRFTPRIQRLNELEAETRVKLNYLDRIARFWEIQASSLKIPHIERRILDLFGLSKVVSDE
GGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVHPFEMFQSGASLPHCKPKHYD
GEEVDKEYKPHSIPLRQSVHPSKMSSYGRRANRCQPDGPEDPNLHPLTTGSQLITAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDRGIRKKDELPQTVTVMDSTPSVPGVTCVK
GEPLLTQDRPTEECSATPQDSPASIPVKTEVKADVKAEVKAEAKSEVKTEVKREELEEHL
HKESRQHFTDGPCTKMTMRLRRNLNNMQSVDSFVCRMCGRGDDDEKLLLCDGCDDNYHTY
CLLPPLTDPPKGNWRCPKCVAEECKKPSEAFGFEQATREYSLQTFGEMADAFKADYFNMP
VHMVPTELVEREFWRLVSSIEEDVTVEYGADIHSKEFGSGFPMNNGKRILTKEEEDYARS
GWNLNVMPVLEQSLLCHINGDISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPK
TWYGVPSVAAERLEGVMKKLTPELFEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGE
FVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMA
ASPEKLDLNLAAATHREMFIIVQEERKLRKALMERGITEAEREAFELLPDDERQCDKCKT
TCFLSALACSTCPERLVCLYHTQDLCNCPIDKLYLRYRYTLDELLAMLHRLKVRSESFDS
WANKVKEALEHEDGNKIGIDYLETLKTEAAERKFPDNELLRKLNTVLKDIEYCQQKSTEL
LANSKTSGTKMTLAELKSLIETMQSLPCVMGQLDEVQAVLQVVSDYQSRAQELVNDRDWR
RNSAPAELLQMLLDQGAQLPVVVPECNLLQGLQELGRWLAEVRRTLGTEGGERPEVTLAV
LRNLIEAGCNVPQSASVDTAMAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEA
QLIPVKLPNIQALQGCLSRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELR
QLELQVASAHSWRDKATKTFLKKSSQHSLLEVLCPCAKRRHNETLEDVDDCDTNTLGLSA
QDLRDPAAIVVAFKEGEQREKEALLRLQKVNMGKTGLNTGDYKEGKGTSDDLMETDSAIC
MKENGNSHGASSVQTVCVCAGQPRAPQLRCHLCKDWFHGGCVPFPSLLPSCGPPGNPRCW
WDWDSRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGHAKEA
LETPELQQALETLQELKETPPCDKEEESPQKDADSSSVIVLSDSEGGEGEDGIIDLTEDF
PKNKSKESNGIEMHVFPQAAGGNGISKSSSITSVGALLPLLPELRGQVVQLSSATKERLE
ELQLEGDLLEVSLDQTHIIGRVLQAASDPPVATLCTLIQTELEEQQRSSRGRTKDSKRKR
KSHRGGDGSVTDGVGAAPLDVSDSKKTCPSPRQATQTHMETL
NT seq 4809 nt   +upstreamnt  +downstreamnt
atggaaggggacgagtttgtagcgcctccggagtgtcccgttttcgagccgtcatgggag
gagttcaaggatcctctgggctacatcgccaaaatacgtccaattgcagaaaagtctgga
atctgtaaaattcgaccaccatcagactggcaaccaccattttcagtggagctggatacg
ttccgatttacgccacgcatccagaggcttaatgaactggaggcggagactcgagtgaag
cttaactatttggaccgcattgccaggttttgggagatccaggcttcctccttgaaaatc
ccgcatatcgagaggcgcatccttgatctatttggcctgtcaaaggttgtgtctgatgaa
ggcggttttgagatggtctgcaaagaacgacgctgggcccgtgtagctcagagactcggc
taccctcctggcaagaacatcggttctcttctgcgctcgcattatgagaggattgtccac
ccctttgaaatgttccagtctggtgccagcttgccgcattgcaagccaaagcactacgat
ggtgaggaagtggacaaggagtacaagccccactccatccctctgcgtcagtctgtgcac
ccatctaaaatgagcagttatgggcgccgagcgaaccgctgccagccagatggtccggag
gatccgaacctccatcctctcaccactggctctcaactcatcacagcgcccgaacctact
gaggaagacatagagaagaacccagaattgaagaagctgcagatctatggcgccgggccc
aagatgatgggacttggacttgttgcacgagacagaggcattaggaagaaggatgaactg
cctcaaactgtgactgtcatggacagtacaccatctgttcctggtgtcacttgtgtaaaa
ggggagcctctgcttacacaagacagaccaaccgaagagtgctctgccaccccccaggat
tcccctgccagcatcccggtcaaaacagaagtcaaagcagacgtcaaagcagaagtcaaa
gcagaggccaagtccgaagtgaagactgaagttaagagagaagaattggaagagcatctt
cataaagaaagtcgccaacattttacagatggtccatgcaccaaaatgacaatgaggcta
cgacgcaacctcaacaatatgcagagtgtggattcctttgtgtgtcggatgtgtggtcgc
ggagatgacgacgagaaactcttgctgtgtgatggttgtgatgacaactaccacacttac
tgtctgctgccccctctcactgatcctcccaaaggcaactggcgatgcccaaagtgtgtt
gccgaagagtgcaagaagccttcagaagcgtttggctttgaacaagcaactcgtgagtac
agtctgcagacttttggggagatggccgacgctttcaaagcagattacttcaacatgcct
gtccatatggttcccaccgagcttgtggagagggagttctggaggttagttagcagcatt
gaggaggatgtgactgtcgaatatggagcagatatccactccaaagagtttggcagcggc
ttcccaatgaacaatggcaagaggattctgacaaaagaggaggaggactacgcccgcagt
ggctggaacttgaatgttatgcccgtactggagcagtctctcctgtgccatattaatggc
gatatctctggcatgaaggtgccttggctttatgttggcatggtattctccgctttctgc
tggcacattgaggatcattggagctactccatcaactacctgcactggggcgaacccaaa
acctggtatggagtaccttcagtagctgctgagcgactagagggggtgatgaagaaactg
actcccgaattatttgagttccagcctgaccttttgcaccagttggtcacaatcatgaac
ccaaacatcctcatggctcatggtgtaccggttgtcaggaccaaccagtgtgccggcgaa
tttgtcatcactttccccagagcataccacagtggtttcaaccagggatataattttgca
gaagcggtcaacttctgtacagcagactggctacctgccggtcgttcctgcattgagcat
tatcgacgtctacggcggtattgcgtcttctctcacgaagagctcacttgtaaaatggca
gccagtccagagaaactagatcttaatcttgctgcagcgacacaccgggaaatgtttatt
attgttcaggaggagagaaagctccggaaagctctgatggaaaggggcatcactgaagca
gagcgggaggcgtttgagctgttacctgatgatgaacgacagtgtgacaaatgcaagaca
acgtgtttcctctcagcactggcttgttcaacctgccccgagcgtctggtgtgcctatat
cacactcaggatctgtgcaactgccccattgacaaactctacctcaggtacagatacacc
ctggatgagttgttggccatgttacaccgcttaaaggttcgctcggagtcctttgattcc
tgggccaacaaagtaaaagaggcgcttgagcatgaggatggaaacaagataggaattgat
tacttggagacactcaagaccgaagcagcagaaagaaagttccctgacaatgaacttcta
cgtaaactcaacactgttctcaaagacatagagtactgccaacagaagagcactgaactc
cttgctaactcaaagaccagtggcacaaaaatgactttggcggaactgaaatcattgata
gagactatgcaaagcctgccctgtgtgatgggtcaactggacgaagtgcaggcggttctg
caggtggtgagcgattaccagagccgggctcaggaattggtcaatgaccgcgactggagg
aggaactctgcaccagcagagctgttgcagatgttactggatcaaggagctcagctgcct
gtcgtggtgccagagtgtaatctgcttcagggccttcaggagttggggcgctggctggca
gaggtcaggcgcactttgggcacagaggggggcgagagaccagaggtgacgttggcagtg
ttgagaaatctgattgaggcaggctgcaacgtgcctcagagtgcatctgtggatacagcc
atggcagaactgcaagagctgctcactattgcggaacgttgggaggagaaagcgcagatc
tgtcttgaacaaaggcaaaagcatcctctctcaacactggaggcgattgtgaacgaggcc
cagcttatacctgtgaagttgccaaacattcaagctttgcagggctgtctaagccgcgca
cgtgcttgggtaacagacctggaggaaatccagaatggggagcattacccgtgcttggat
gatttggagggcctggtggccattggacgggacctgcccgtcttcatggaggagctgcga
cagctggagctccaagtggcgagcgctcactcctggagggacaaggccaccaagaccttc
ttgaagaagagcagtcagcacagcctactagaggttttgtgtccatgcgctaaaaggaga
cacaatgagacattagaggatgtggacgactgtgataccaacactctaggcctatccgct
caagaccttcgagaccctgcagctattgtggtggccttcaaagaaggggagcaacgggag
aaggaggcactactgaggttacagaaagtcaacatggggaagactggacttaatacagga
gattacaaggagggcaaggggacgtcggatgatctcatggaaacggactctgcaatctgt
atgaaagagaacgggaactcccacggcgcctcctctgttcagacggtgtgcgtgtgtgct
ggtcagccacgagcacctcagttacgctgccacctgtgcaaggactggttccacggtggc
tgcgttcccttcccctcgctgctgccctcttgtggaccgccgggtaacccgcgctgctgg
tgggactgggactcgcgctttctgtgtccgcggtgccagcgctcgcggcgcccccgtctg
gagactatcctagcgttactggtggccttgcagaggttgcccgtgcgcctgcccgagggc
gaggcgctgcagtgtctcacggagcgagccatcacatggcagggtcatgccaaggaggca
ctggagacccccgagctgcaacaggcccttgagacgctccaagaactcaaagaaaccccc
ccttgtgacaaagaggaggaaagtccacagaaagacgcagactccagctcagtcattgtt
ttatccgactcggagggaggtgaaggagaggacggaatcattgatctgacggaagatttc
cctaaaaataaatccaaggagtccaatggcattgagatgcatgttttcccgcaggccgct
ggtggcaacggcatcagcaagagctccagcatcaccagtgtgggcgcgttgctgccactg
ctgcccgagctcagaggtcaggtggtgcagctttcgtcagccacgaaggagcgactagag
gagctgcagctggaaggagatctgctcgaggtctctctggaccagacgcacatcatcggc
agagtcctgcaggcggcctccgatccgcccgtggcgacactatgcacactcattcagacg
gaacttgaagagcagcagcgaagcagtcgaggccgtacgaaggactctaagaggaagcga
aagagccaccgaggaggcgacggcagcgttacagacggtgtaggagcggcaccgctggat
gtttccgactccaagaaaacatgcccctcccctcgccaggctacccagactcatatggag
actctgtga

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