Hippocampus comes (tiger tail seahorse): 109519449
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Entry
109519449 CDS
T04969
Gene name
ddb2
Definition
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03420
Nucleotide excision repair
hcq04115
p53 signaling pathway
hcq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109519449 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
109519449 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
109519449 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109519449 (ddb2)
03400 DNA repair and recombination proteins [BR:
hcq03400
]
109519449 (ddb2)
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
109519449 (ddb2)
DNA repair and recombination proteins [BR:
hcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109519449 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
109519449
NCBI-ProteinID:
XP_019731547
UniProt:
A0A3Q2Y5P2
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MKSKPSKSDSFESKKVKVKKGAGGEMSGATLSAKPQDKKDAKACKKGSPLKSSGIQKKSG
HSILHYIYKHTLGQSVHTQMKQCLQEPFIRSLTLYHYHASNHPFDRRVTCLEWHPTNPTT
LALGSKGGDIELWDFKLRDRKMFIRGNGAGDFIGGMKFCPTDLSRVYVASGEGTLTMQSF
EGLTTTIIAKTEDCGHHHHNVCFWYCCVDVSISRQMLATGDNVGNCLLVGLDGQKIFSEK
LHKAKVTHAEFNPRCDWLLVTASVDHTVKLWDLRNMKDKNSFLYDMPHEKAVNSAYFHPS
DCSKLVTTDQYDQIRVYSSSDWSKPQHIIQHPHRHFQHITPIKATWHPVYDLIVVGRYPD
DKICLGDQRTIDIFDSNTAELVCQLHDPNVAGIKCINKFNPMGDVIGSGMGVSVVLWDQD
ESLLGDEHTPQEEVPTSAERPQRERGRQQQATRSRRSGADQSKLKKKLLSAHESETTTKT
KCAKRTRKL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaaaccctccaaatcagatagcttcgagtccaaaaaggttaaggtgaagaaa
ggcgctggcggggagatgtctggtgcaactttgtccgcaaaaccgcaggacaagaaagat
gcaaaggcatgcaaaaaagggtctcctctcaagtcctcaggaatccagaagaaaagtgga
catagcatactccactacatctacaagcacactctgggccaaagtgttcatactcaaatg
aaacagtgcctccaagagccttttatccgctcgctcactttgtaccattatcacgcgtca
aaccatcccttcgaccggcgagtcacctgcctggagtggcatcccactaatcccaccaca
ctggcgttgggatcgaaaggtggcgacatcgagctgtgggactttaagctccgtgaccgg
aagatgttcatcagagggaatggcgccggagacttcatcggagggatgaaattttgcccc
acggatctgtcccgagtgtacgtggcctctggtgagggcacactgaccatgcagagcttt
gagggcctcacaaccaccattatagccaaaacggaagattgtggccaccatcaccacaac
gtatgtttctggtactgctgtgttgacgtgtccattagccgacagatgcttgcgactgga
gacaatgttggaaattgcctcctggtgggtctagatgggcagaagattttcagtgagaag
ttacacaaagccaaagtgactcacgctgagttcaacccacgctgcgattggctgcttgtg
acggcgtcagtagaccacacagtgaagctctgggacctgagaaacatgaaggacaagaac
agcttcctttatgacatgcctcacgagaaagccgtcaactcagcctattttcatccctcg
gactgctccaaattggtaacaactgatcagtacgaccagatccgtgtgtattcatcctct
gattggtcgaagcctcagcatatcatccaacatccacacagacattttcaacatatcaca
cccatcaaggctacatggcatcctgtgtatgaccttattgtggtgggtcgttaccccgac
gacaagatttgcctgggcgaccagagaaccatcgacatctttgattccaacacagccgag
cttgtgtgtcagttgcacgatcccaatgttgcgggaatcaaatgtatcaataaattcaat
ccaatgggagatgtgattggctctggaatgggtgtatcggtggtactttgggaccaggat
gagtcattgttaggtgatgaacacacgccgcaggaggaagtgcctacctcggctgagcga
ccacaaagggaacgcggtcgtcagcaacaggccacccggagcaggagaagcggcgcggat
caaagtaaactcaagaaaaaactgctgtctgcgcacgaatcagaaacgacgaccaagact
aagtgcgcaaagcgcacaagaaagctgtga
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