KEGG   Hippocampus comes (tiger tail seahorse): 109522778Help
Entry
109522778         CDS       T04969                                 

Gene name
setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    109522778 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hcq03036]
    109522778 (setdb1)
Enzymes [BR:hcq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     109522778 (setdb1)
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     109522778 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109522778 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Tudor_4 TUDOR_5 DUF5604 Pre-SET MBD 53-BP1_Tudor DUF4537
Motif
Other DBs
NCBI-GeneID: 109522778
NCBI-ProteinID: XP_019737126
LinkDB All DBs
Position
Unknown
AA seq 1242 aa AA seqDB search
MMPEKHAPTHFAPSLSKLAVGIDVRARKMDTGDAMEVEGWDSALEDELGVSLDELKKLIN
EMVENSELVQKKRAQLSELTQQVEQKEQEEAATEKLINDTKKSLVECEKLVRETYQKNGL
VYKSSSEDEDGGGGGPTSAEVIEIDDDDDDDDVIAVGCLVPPQKSVITIQEPMDTASAIR
KTAEQVNKLVQIVTRPSPGTTLTRSPAQSGTHPTPPAVIVSQISAQPVSHLSPKKREDEL
QVGMNILGKKRMKTWHKGTLVAINAIGTNSYKYKVKFDKGKSLLSGNHVAFDYNPTLESL
FVGARVVAKYKDSHQMWLYAGIVAEMPTTKNQMRFLIFFDDGYASYVNLPDLFPVCRPLK
RTWEDIEDASCRDFIEEYITAYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKIL
FLDDKRSEWIYRGSTRLEPMFNLKMTTANTQEKKLAGQLRTRPNMGALRSKGPVVQYTSD
GHVGASPIGVSPIKPAPPQGLLTPQIQQPPTTPTSSNLTQLPRSETKHQMAKKSTSPFVP
GVGGTHASKVMQSLATNPSNVPSPAETSMPVQLYPKATVAPAAPPATAHPAVTIPHQPSY
RAPTDRIFYMEHLCQPACLNRVRPAKRDMHRGKNPLLIPLLYDFRRMTGRRKVNRKMTFH
VIYKAPCGLCLRNMTEIQRYLFQTTCDFIFLEMFCLDPYVLVDRNFQPLRPFYYIADITG
GNEDIPLSCVNEIDSTPPPKVAYSKERIPEDGVFINTSPDFLVGCDCTDGCQDKSKCSCH
QLTLQATGCTPGGQINPNAGFLNKRLEECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVR
LQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVE
NFKEGYESEAHCSDSEGSGVDMSRLKIQPSALVAANSFGRQGKKADSSRSSEESNEEEDK
DSKSDESDSSDDTFVKDTYYSSSSVWRSYTTRGQAKGHKEGSQDDKDGNPAAAKGDDKSL
PVTEETGKSKVASWLTSQGMKKDSGDLKSQVKPDTPKKQDITTLSDSDDVQTISSGSDDN
KEKDKVAPGVVKKQVAVKSTRGIALKTGHGMMVKTGAPGGGASQGGPGGKSGQQGTTGGG
GESGHKNTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAF
FASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq 3729 nt NT seq  +upstreamnt  +downstreamnt
atgatgccggagaaacatgcgccgacccatttcgctcctagcttaagcaagttagcggtt
ggtattgacgtccgagcacgcaagatggacactggcgatgcaatggaagtggagggctgg
gactcggctctggaggatgagctgggtgtctctctggatgagctgaagaagttgatcaac
gagatggtggagaacagcgagctcgtgcagaagaaacgggctcagctcagtgaactgact
cagcaggtggagcagaaggagcaagaggaggcggccacggagaagctcatcaacgatacc
aaaaagtcattggtggagtgcgaaaagttggtgagggagacgtaccagaagaacgggctg
gtgtacaagagcagctcagaggacgaagacggcggcggcggcggccctacaagtgctgag
gtcatagagatagacgatgacgatgacgacgatgacgttatcgccgtcggatgcttggtc
ccgccacagaaatctgtcatcaccattcaagaaccaatggataccgccagtgcgataagg
aaaacggctgagcaggtcaacaaattggtccaaatcgtcaccagaccttcgcctgggacc
accttaaccagatcgccagcacagtcaggtactcaccccacgccgccagccgtgatcgtg
tctcagatcagcgctcagcccgtgagccacctcagccccaagaagagagaagatgagctg
caagtgggcatgaacattctgggcaagaaacgcatgaagacctggcacaagggcaccctg
gtcgccatcaacgccattggcaccaattcctataagtacaaagtgaagtttgacaaaggc
aagagtctgctctcggggaaccatgtggccttcgactacaaccccaccttggagagtctg
tttgtgggggcccgcgtggtggccaagtacaaggacagccaccaaatgtggctgtatgcc
ggcattgtggcggagatgcccaccaccaagaatcagatgaggttcttgatcttcttcgac
gacggctacgcttcctacgtcaacctgccggacctcttccctgtctgcagaccactgaag
cgtacgtgggaggacattgaggacgcatcgtgccgagacttcatagaggagtacatcacg
gcgtatcccagcaggcccatggtgcttcttaaagttggccagatcatcaaaacagagtgg
gagggaacctggtggaaaagtaaagtcgaggaagtggacggcagcttggtcaagatcctt
tttctggatgataagaggagtgagtggatctaccgcggctccaccaggttggagccgatg
ttcaacttgaagatgaccaccgccaacacgcaggagaagaagctggccggccagctgagg
acgcgacccaatatgggtgcactgagaagtaaaggccccgtagtccagtacactagcgac
ggccatgttggagcttctcccattggagtttctccgatcaagccggcaccccctcagggc
cttctgacacctcaaatccaacagccgccaaccaccccaacaagcagtaacctcactcag
ttgccacgttccgaaaccaaacatcagatggccaagaagagcacgtctccgtttgttcct
ggcgtaggcggcacccacgcctctaaagtcatgcagtcgctcgccaccaaccccagcaac
gtgccaagtcccgcagagacttccatgccggttcagttgtatcccaaagcgacggtggcc
cccgccgccccgcccgcgacggcccacccggcggtcaccatcccgcaccagccgtcgtac
cgagccccgaccgaccgcatcttctacatggagcacctctgccagccggcctgtttgaac
cgcgtacggccggccaagcgcgacatgcaccgagggaagaaccctctcctcataccgctg
ctgtacgacttccgacgcatgacgggccggcgcaaagtcaaccgcaagatgaccttccac
gtgatctacaaggccccgtgcggcctctgcctacgtaacatgaccgagatccagcgctac
ctcttccagaccacctgtgacttcatcttcttggagatgttctgtctggacccctacgtg
ctggtggaccgcaacttccagccgctcaggcccttctattacatcgcagacatcaccgga
gggaacgaggacatcccgctctcctgcgtcaacgagattgattccacgccgccccctaaa
gttgcctacagcaaagagcgcattccggaggacggggtgttcatcaacacaagtccagac
ttcctggttgggtgcgattgcaccgatggctgtcaggacaagtccaaatgttcttgccac
cagctgacactacaggctaccggttgtactcctggtggacagatcaacccaaacgctggc
tttctgaacaagcgcctcgaggagtgcctacccacaggcatctacgagtgtaataagcgc
tgcaagtgctgctctcaaatgtgcaccaaccggctggtgcagcacggcctgcaggtgcgc
cttcagctcttcaagacccaaaacaaaggctggggcatccgctgcttggatgacgtggcc
aagggctccttcgtctgcatctacgccggtaaaatcctgacggatgactttgccgacaaa
gaaggcttggagatgggtgacgagtattttgcgaacctggaccacattgagagtgtggag
aacttcaaggagggctacgagagtgaggcccactgctccgacagcgagggcagcggtgtg
gacatgtccaggttaaaaatccagccgtctgccttagtggcagcaaactcctttggacgg
cagggcaaaaaggctgacagctcgaggtcgtccgaggaaagcaacgaggaagaagataag
gattccaagagtgacgaaagcgacagttcggatgacacgtttgtcaaagacacctactac
agcagcagttctgtgtggaggagttacaccacgcgtggacaagccaaaggccacaaggaa
gggagtcaagacgacaaagatgggaatcccgctgcggccaaaggtgacgacaagtcgctg
cccgtgaccgaggagacgggaaaaagcaaagtggcttcctggctcaccagccagggaatg
aagaaggactctggagacctgaagagccaagtgaagcctgatacgcccaaaaagcaagac
attaccactctctcggacagcgacgacgtccagaccatcagctccggatcagacgacaat
aaggagaaagacaaagtcgccccgggcgtggtcaagaagcaagtggccgtgaaatccact
cgcggcatcgcgctcaagaccggccacggcatgatggtgaagacgggcgcacctggaggc
ggagcgtctcagggcgggcccggcgggaagtcgggccagcagggcacaaccggcggcggc
ggcgagagcggccacaaaaacacgcggcaattcttcgacggcgaagagtcatgttacatc
atcgacgccaagctggagggaaacctcggccgctacctcaaccatagctgcagtcccaac
ctgtttgtccagaacgtctttgtggacacgcacgacttgaggttcccctgggtggctttt
tttgctagcaagcgtatccgggcgggcacggagctgacgtgggactacaactacgaagtg
ggcagcgtggagggcaaagtgctgctttgctgctgcggctccaccgagtgtcgcggtaga
ctcctgtga

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