Hippocampus comes (tiger tail seahorse): 109523314
Help
Entry
109523314 CDS
T04969
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109523314 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109523314 (lmo7)
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
109523314 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109523314
NCBI-ProteinID:
XP_019737920
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MEWREQSTVSCQDAYVEAQRWIEAVTKKTFKGKDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNINVFRKACLKIGLKEAQLFHPGDLQDLSSRVTVKDEETDRRLKNVLIT
LYWLGRKAQGERSYDGPYLNFKAFEGLLGTALHKALQELSGQKGNSVQDSDLGDNWYSER
EERHQLRGRGGGHRREDSLDSLDSLGSQTLSFSSDATLKGSSEGCCSDAEADAAFKMSNN
KESLSYRRSVTLTPKVTTQFNQFLPTKDKATGYVPAPLRKKRTERNDDNRRSWANPVSMD
EDDLPITRQRQASDSFDGSKSTSDVSEEPVLVRRLSQYEALEKYREQVKQSDDKWQDDLS
KWKNRRKSVNSDIVKKKEEREMVEQITSGGSTRKSKTYKEMQDERENRRSSSIGSRIGSL
SFDNDNDVFEKPKPRPRDSISRSYTVDTFYHSSGSSKSAQKEDKPPEVPLRSTKQGSDVV
DAPGVTTARGSFHRLKPSEATSSLRSSVFESTTTTEEISRPPKASQKVPEPKSPVKVQPP
SSAAIYKPSLQSKTEANAAAVSRISASLPRSYQRSDSARLSSVVTPRPFGTQLSRVGSLN
RTVTSYESNSRINGNAAISKNSSVPSRYHQFMTAEDEAESQSSPIQSSEDDDDTPEETTV
KSVTSTSSVSSRTVEIKREVSATEPSKESTCEMRISLNQKPNSSRDFGFDVAWDSSGAHV
KSIQPGSPAEMFQLQAGDEVLTVNGQRVADMGYLDWKASMDRALQEGSLVMDIRRYGKSN
WDRDPSSPLFKGYKTINLTTTDHPILVGFSDAGGAMLDFTSLTDTSAKAASHSLVDVASN
GIGGGYPKVSMMTQESEPISMINLKRRSEFFEKGAADSAMPDIPVPPITASSTRWSWDPE
EERRRQEKWQKEQERQLQEKYKRDQEKLQEEWTKAQQEISSSFPQSEPVGSTLAYRELQQ
ERERLELERKRREEEEEQERMKLEMERKLREEEFERQRQEMRRREEELERERREIERKRR
EQEQELERQRQEMRRREEELERQRQQEVEKRRREEELERLKLEEERRKKEAEEERQRQAE
EERRRIREKEEEEERRKREEEELLWERRREAEKEELRRRLAAADEQQWQERHNIFEEQRA
KSLDNEERLPSSGVFVYRSSAVHWLLEEQAKNTRDKVAHGQRAVSELEKQRRNLLNAKRY
REPERVIGGDVVDTKFAQPPSQAELQRQQLLNDMRKKTNLLTDSSWIRQRSATTPGHDDL
PSTRRGGSLDHLDKPVNSWRSSWAPRSESYIPNYSRPHSAIYGSAPLFGGGPPGAGSGAS
SLPPSFRGPAVGTTPWSRQSASPLPSSVSPTTSSESGPDAGGQRQRSRSVSGKKVCTLCD
TALGKGAAMIIESLGLCYHLNCFKCIDCKSVLGGSEAGAEVRIRNKQLYCNSCYMRFKTG
QPTPM
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgagaacagtccacggtgagctgtcaggacgcgtacgtggaggctcagagg
tggatcgaagcagtcaccaagaaaacatttaagggcaaagacttccgatcggctctggag
aatggcgttttgctgtgcgatctgatcaacaagatcaagcctggcatcatcaagagagtc
aacaggctgccaacaccaatagctggtctggacaacattaacgtcttccgcaaggcctgc
ctcaagatcggactcaaggaggcgcagctctttcaccccggagacctccaggacttgtcg
tcaagagtcacagtcaaggacgaagagaccgaccggagactcaaaaatgtgctgataaca
ctttactggcttggtagaaaagctcagggcgagcgttcctatgatggaccttacctgaat
ttcaaggcgtttgagggattacttggcacagcacttcacaaggctctacaagaattgtct
ggtcagaaaggcaacagcgtccaagacagtgatttgggagataactggtattcagaacga
gaggagcgtcaccagttaagaggaagaggaggtggacacaggagagaggattcgttggac
agtttggactctctgggctcccagacgcttagcttctcatcggacgccacactgaaaggc
agcagcgagggttgttgcagcgacgccgaggccgacgcagctttcaagatgtccaacaac
aaggagtctctttcttaccgccgctccgtcaccctcacaccgaaggtcaccacacagttc
aaccaattcctgcccacgaaagacaaggccacaggatatgttcccgctcctctgaggaag
aaacggaccgagcgcaacgatgacaatcgacgcagctgggccaatcctgtttccatggac
gaagatgacttaccgatcaccagacaacggcaagcatcagacagtttcgacgggagcaaa
tcaacaagtgacgtcagtgaagaacctgtgttggtcagacggctgtctcagtatgaagct
ctcgagaaataccgcgagcaggtcaagcagagcgatgataagtggcaggatgacctaagc
aaatggaaaaaccgacgtaagagtgtcaactctgacattgttaaaaagaaagaagagcgg
gagatggtggaacagatcacatccggcggcagcacccgaaagtccaagacctacaaagag
atgcaagatgagagggagaacaggcgaagcagcagcatcggcagtcgcatcgggtcgctc
agttttgacaatgacaacgatgtatttgagaaaccgaaaccccgtcctcgagacagcata
agtaggagctacactgtggatactttttatcactcatctggctcatccaagtctgctcag
aaagaggacaagcccccagaggtcccgctcaggtccacgaagcaggggtctgatgtcgta
gatgctcctggcgtgaccaccgctcgcggttcctttcacagactcaaaccttccgaagcc
acgtcctccctcaggagttcagtctttgaaagcacgaccacaacagaggagatctcacgc
cctccgaaagcctcacaaaaggtgcctgagccaaagagcccagtcaaggtgcagccccca
tcttctgctgccatctacaaaccatcgctgcaaagcaagacagaagccaatgctgcagcg
gtttctcggatatccgcctccctgcctagaagctaccagagatcggatagtgctcgactg
tcatcagtcgtcactccgagacctttcgggacccagctatcccgtgtaggctcacttaac
cggaccgtcacatcgtatgagtccaacagccgtatcaatggcaacgctgctatttccaaa
aactcgtcggtgccgagtcgctatcaccagttcatgaccgccgaagatgaggccgagtcg
cagtcgagccccatccaaagcagcgaggatgacgatgacactccagaggagaccacggtg
aagagtgtcacctccacgtcaagcgtctcatcccgcacagttgagatcaaaagagaagtt
tcagccactgaacccagcaaggaaagtacgtgcgagatgcggatcagcctcaaccagaag
cccaacagcagtcgcgactttggctttgatgtggcatgggactctagcggggctcacgtc
aagtccatccaaccaggcagcccagctgaaatgttccagttgcaggctggggacgaggtg
ctgacagtaaatggccaacgggtggcagacatgggctacctggattggaaggccagcatg
gaccgggctctgcaggagggcagtttggtgatggacataaggcgttatggcaagagcaac
tgggacagagatccgtcttccccgctattcaaaggctataagaccatcaatctgaccact
acggatcatcccatacttgtaggtttctctgatgccggtggtgccatgctagatttcact
tcgctcactgacacatctgccaaggccgccagccactctctagtagatgtggcttccaac
ggcatcggtggtggttaccccaaagtgtccatgatgactcaagaatcagagcccatttct
atgataaacttaaaacggagatcagagttttttgaaaaaggagcagcagactctgccatg
ccagatatacccgttcctccaatcactgcgtcttcgactcgttggtcttgggatccagaa
gaggagcgcaggagacaggagaagtggcagaaggagcaggagcgccaactacaggagaaa
tataagcgtgaccaggagaaattgcaggaggaatggacaaaggcccagcaggagatctcc
agcagtttcccacaatccgagcctgtgggctcaaccctcgcctaccgggagctgcagcag
gagcgagagaggctggagctagagaggaagaggagggaggaggaggaggagcaggagcgc
atgaagctggagatggagaggaagctgagagaggaggagtttgagcgccaaaggcaggag
atgaggaggcgggaggaagaactcgaacgagaaagacgggaaatagagaggaagaggagg
gagcaggagcaagagctggagcgccaaaggcaggagatgaggaggagggaggaggagctg
gagcgtcaaaggcagcaggaggtggagaaaaggaggagggaggaagagcttgaacgcctg
aagctagaggaggagaggaggaagaaggaagcggaggaggagcgccaaaggcaggcggaa
gaggagaggaggaggatcagggagaaggaggaagaggaggagaggaggaagagggaagag
gaggagcttctgtgggagaggaggagggaggcagagaaagaggagctgaggaggaggctg
gcggctgcggacgagcagcagtggcaagagagacacaacatcttcgaggagcagagggct
aaatcgcttgacaatgaagaaagacttccgagcagcggtgtgtttgtgtatcggtccagc
gcggtccactggttgctggaggagcaggccaagaacacacgcgacaaagtggcacacggt
caaagggccgtaagcgaattggaaaagcagaggaggaatctcctcaatgccaagagatac
agggagcctgagagagtgataggcggtgatgtggtcgacacaaagtttgcgcagccgcca
tcgcaggcggagctccaacgccagcagctcctgaacgacatgaggaagaaaactaacttg
ctgacggacagcagctggatccgccaacgatccgccaccactcctggccacgacgacctg
ccatcaacacgcaggggcggctcgcttgaccacctggataaacccgtcaactcctggcgt
tcgtcgtgggctcccaggagcgagtcttatattccaaactactccaggcctcactctgcc
atctacggcagcgctccccttttcggcggcgggccgccgggggcgggttccggtgcaagc
tccctgcccccctccttccggggcccggcggtgggaacgaccccttggtctcgacaatcg
gcatcccctttgccatcttctgtgtctcccaccacctcttcagaatctggtcctgacgca
gggggtcagcggcagcgcagcaggtcagtgagcggtaagaaagtgtgcaccttgtgtgac
acggcgctgggaaaaggagcagccatgatcatcgagtcccttgggctctgttatcatttg
aactgttttaagtgcatcgactgcaagtcggtcctcgggggatcggaagccggggcggaa
gtccgaatccgaaacaaacagctctactgtaactcctgctacatgcgattcaaaactggc
cagcccacgccaatgtga
DBGET
integrated database retrieval system
