Hippocampus comes (tiger tail seahorse): 109523695
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Entry
109523695 CDS
T04969
Gene name
apaf1
Definition
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04115
p53 signaling pathway
hcq04210
Apoptosis
hcq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109523695 (apaf1)
04115 p53 signaling pathway
109523695 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109523695 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
APAF1_C
NB-ARC
ANAPC4_WD40
CARD
Ge1_WD40
WD40_like
eIF2A
CARD_2
AAA_16
Utp8
Motif
Other DBs
NCBI-GeneID:
109523695
NCBI-ProteinID:
XP_019738589
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MMLDEGARSSLLRFRQNLEQDIKPAYLMDHMISDGVLSGEEEERISEWPSRKEQAASLLE
LLLKKDNSAFISFYNALVKEAYYDLANLLHAALPGDTPNSSNSTSDVQIVLSAGGVPQRP
VVFVSRPELINKIREKLYHLRQDTGWVTVFGMAGSGKSVLVAEAVRDQRLIEECFPGGIH
WLSIGQLDKANLLVKIQALCFRLEQSLDSQSLQRPPTSLDEAKERLRFLVLRRYPRSLLI
LDDIWDSTVLKSFDIHCRILLSTRNRSLTDSVSGAKHEVEVESGLDDNKALEIIALYTRN
ALECLPEEARSIVRECKGSPLVVSLIGALLKEKPDRWSYYLRQLQQKQFKRIRKSSSYDY
DALDQAMAASIEVLPDEHRELYRDLAVLEPDIKIPAKVLSILWDLEPEEVEDILEEFVNK
SLLFVDSHRKPALYYLHDLQLDFLVEQNRAQLENLHTKVVRQYQQHYSETPPTSGDEECL
YWIRFLTYHMAKANLSQELYSLMFSLDWITHKAQILGPAHLLNDFVEYGSILDKKNSNVR
SHFQEFLSLNGHQLEQRPFPDVVQLALSQPQASEVYRQALQRAQERARSGKLYFDWLNKS
SVESLSRLVIHPHQGSVYAACFSQDGTKIASCGASKTLKVFRSTSGEKLTEIQAHDDEVL
CCAFSPDDRLLATCSSDRKVKVWNAERGMLLRVFEVEHEEQVNHCQFTNTRRRLLLATCS
NDSFLNVKLWNLNKPTSQNTMFGHFEPVNHCCFSPDDAYLSTSSNDGTVKIFEVSSANEW
KTINVREWCAEAGEEVPVKCSTWTGDGKRVVCAVRSAVLVMDVETSQMLLEIRTGRLSMV
QYCDACPTSNLLAIAFSNYAVELWDLADNKKMADCSGHLSWVQRVQFSPDGSQLLSCADD
QTVRLWQTDKVHTTSAVRLKRDSDAFFDSGEDGQFFVSAADNCNRLQVRAGRAGSLLFQS
EEMASRIRCTCFCSKPLAVAFGTEDGTVEILAIPSGKVLATLLGHTKTVLHCQFLHAGQT
LITSSEDTTINVWKWQSHECLVLRGHKEQVRCFSLLSPAETRMLSCSFDGTVKVWELESG
EELQHIEAHRGAILSCHVSPDGRFFATTSADKIAKVWWHSESWQCVHVLCGHQDCVRSCR
FSCDGRRLATGDDGGEIRLWSVTEGTLLKICSRDGKDGLDSLHGGWVTDLHFSPDDSLLV
STGGYVKWWDVDKGEALQTFYPTGSALKKVHVSPDFSTFVTIDNIGILYVLQRVV
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggacgaaggcgcccggagcagcctgctacgctttcgccagaacctggagcag
gatatcaagcctgcctacctgatggatcacatgatcagtgacggcgtgctgagcggcgag
gaggaagagaggatcagtgaatggcctagcaggaaagagcaggcggcgtcgctactggaa
ctgctgctcaagaaggacaacagcgcttttatctcattttataatgctctcgtcaaggag
gcgtactacgacttggctaatttgcttcacgccgcccttcctggtgacacaccaaacagc
tctaacagcacatctgatgtccaaatagttctgagcgcaggcggggtccctcagaggcct
gtggtttttgtcagccgacccgaactgatcaacaagatccgggagaagctctaccatctc
cggcaggacacgggatgggtcactgtgttcgggatggccggctcgggaaaatctgtgctg
gtggcggaagctgtacgagaccagagactgattgaagagtgcttcccaggaggtatccac
tggttgtccatcggccagctggacaaagccaacctgctggtgaagatccaagcgctgtgc
ttccgcctggagcagagcctggactcccaatccctccaacggcctcccacctccttggac
gaggccaaggagcgtctgcgcttcctggtgttgcgcagataccccagatctctgctgatt
ctggatgacatctgggacagcacggtgctgaaatcattcgatatccactgccgcatcctt
ctgagcaccaggaatagaagcctcactgactcagttagtggtgccaaacatgaagtggag
gttgagagtggtttggatgacaacaaggcactggagattattgccctgtataccagaaac
gcactcgaatgtttgcctgaggaggctcggagcattgtgagagaatgtaaagggtcccct
ctggtggtctccctgattggcgcgctactcaaagagaagcccgaccgttggagctactac
ctgcggcagctgcagcagaagcagttcaagcgcatccgtaaatcgtcgtcatacgactac
gacgcgctggaccaggcaatggcggccagcatcgaagtgctgcccgacgagcaccgggag
ctctacagggacctcgccgtgctggagcccgacatcaaaattcccgccaaggtgttgtcc
attctgtgggatctcgagcccgaggaggtggaggacatcctggaggagtttgtcaacaag
tctcttctgtttgtggacagtcaccgcaaacctgcactgtactacctccacgacctccaa
ctggacttcttggtcgagcagaatcgcgcccaactcgagaaccttcacaccaaggtggtg
cgtcagtaccagcagcactacagtgaaaccccgcccacatctggagacgaagaatgcctc
tactggatccggttcttaacctaccacatggccaaagccaacctctcccaggagctctac
tcgctcatgttctcactggactggatcacccacaaggcccagatactgggtccggctcat
cttttaaatgactttgtggagtatggatccattctggataaaaagaacagcaacgtgcgc
agtcacttccaggagtttttgtccctcaacggccaccagctggagcagcggccgtttccc
gacgtggtccagctggctctgtcgcagcctcaggcttcggaagtctacaggcaggctctg
cagcgggcgcaggagcgggccagaagcgggaaactctattttgactggctaaataagagc
agcgtggagagtctttcccggctggtgatccatccgcaccagggctccgtctacgccgcc
tgcttctcccaggacggaaccaagatcgcctcgtgtggagccagcaagacgctcaaggtt
ttcaggagcacgtccggcgaaaagctgaccgagatccaagcccacgatgacgaggttctc
tgttgcgccttttcccccgacgaccgtctcctagcaacttgctccagcgacaggaaagtg
aaggtgtggaacgcagagcgtggcatgttgctgagggtctttgaggtggaacacgaggag
caggtcaaccactgccagttcaccaacacgcgacggcgtctcctgctggccacctgctcc
aatgacagtttcttgaacgtcaagctgtggaacctgaacaaacccacctcacagaacacc
atgtttgggcactttgaaccggtcaaccactgttgtttctcccccgacgacgcctatctc
tccacctcctccaacgacggcaccgtgaagatcttcgaagtgtcctccgccaacgagtgg
aagaccatcaacgtgcgggagtggtgcgcggaagccggcgaggaggttccggtcaagtgc
agcacgtggacgggcgacggcaaacgggtggtgtgcgccgtcaggagcgccgtgttggtg
atggacgtggagacgtcgcagatgctattagagatccgaacgggtcgcctgagcatggtg
cagtactgtgacgcgtgtcccaccagcaacctgctcgcgatcgccttctccaactatgcg
gtggagctgtgggacctggcggacaataagaagatggccgactgcagcggtcacctgagt
tgggtccagcgagtccagttctctcctgacggctcgcagcttctctcttgcgccgacgac
cagaccgtcaggctatggcagacggataaagtgcacaccacctccgcggtgcgcttgaaa
agagactcggatgctttctttgactcaggggaagatggccaattttttgtttcggcggca
gacaactgcaacagactgcaggtgcgcgctggcagagcgggttcactgcttttccagtca
gaggagatggcgtcgcggatccgatgcacgtgcttttgctcgaagcctttggccgtcgcc
ttcggcacagaggacggcaccgtggagattctggccatcccctctgggaaggttctcgcc
accctgctgggccacaccaagacggtgctgcactgccagttcctccacgccggccaaact
ctcatcacgtcatccgaggacaccaccattaatgtgtggaagtggcagtcgcacgagtgc
ctcgtgctgcggggccacaaggagcaagtgcgttgtttctctctgctgtcgcctgctgaa
acacgaatgctgtcctgctcgtttgacggcacggtcaaggtttgggagctggaaagcgga
gaggagttgcagcacatcgaggctcaccggggagccattttgtcttgccacgtctcccca
gatggacgtttctttgccaccacctctgctgacaagattgccaaggtctggtggcacagt
gagtcctggcaatgtgtccacgtactgtgcggccaccaagactgcgtccggagttgccgc
ttttcctgtgacgggcggcggctggcgacgggggatgacggcggcgagatccggctgtgg
agtgtcacggaaggcaccttgctgaagatatgctcgcgagacggaaaggacggcttagac
tcgttgcacggaggctgggtgaccgacctgcacttctccccggacgactccctcctggtg
tccaccgggggatacgtcaagtggtgggacgtggacaaaggtgaagccctgcagaccttc
tacccgaccggtagcgcgttgaagaaggtccacgtgtcacccgatttttccacattcgtc
actattgacaacatcggcatcctctacgtcctccagagagtggtatga
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