Hippocampus comes (tiger tail seahorse): 109528425
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Entry
109528425 CDS
T04969
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
3.6.4.13
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109528425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109528425
03041 Spliceosome [BR:
hcq03041
]
109528425
03036 Chromosome and associated proteins [BR:
hcq03036
]
109528425
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109528425
mRNA cycle factors
Common to processing body (P body) and stress granule
109528425
Spliceosome [BR:
hcq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109528425
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109528425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109528425
NCBI-ProteinID:
XP_019746543
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MSHVSVENVHGLEQQLAVLDLNVADGQGGGTNRRYIPPHLRNKDGPKNGGNVFAARAGYT
IAPAAAFGWDGARGNFVNGYHDNRMTGGNTYNRGPPRMERGRGGMGGGGYRGNRGGSFNP
INPAQSMGFGLYESKDAGGWNTAKDAYSSFGNNRGKSAFFNDRSNANRGRFDHGGYSGGG
NSRWVEEACTDGDWSKPTPLNERLEHELFSGSNTGINFEKYDDIPVEATGQNCPHHIESF
QDIDMGEIIMGNIALSRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPVLSQI
YAEGPGDALNAAKASGQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSRVRPC
VVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFE
PQIRRIVEQDTMPPKGNRQTMMFSATFPKEIQILARDFLDDYIFLAVGRVGSTSENITQK
VVWVEESDKRSFLLDLLSATVIPSEVQDNAGENMEKPGKDSLTLVFVETKKGADALEDFL
YREGYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSD
IEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHK
SSNRGRSKRFAGGFGARDYRQTAAGGNAGGFGARGVRNQVGHGGARGFAAGGFGTFYTSD
GYGGNYSHSQVDWWGN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtgtccgtggagaatgtccatggtctagaacaacagcttgctgtcctagac
ttgaatgtggcagacggacaaggtggtggcaccaacagaagatacattcctccacattta
cggaacaaagatggtcctaaaaatggaggaaatgtgtttgctgccagggcaggctacacc
atcgcacctgccgccgcctttggctgggatggggcccgcggcaactttgtcaatggctac
catgacaaccgtatgactggcgggaacacttacaatcgtggcccgcctcgcatggaacgg
ggccgagggggcatgggcggaggcggctatcgtggcaacagaggtggatccttcaatccc
atcaaccctgctcagtcaatgggcttcgggttgtatgaaagcaaagacgctggcggttgg
aacactgccaaggatgcctacagcagcttcggaaacaatcgaggaaaatctgctttcttt
aatgacagaagcaatgcaaatcgtggacggtttgaccatggtgggtatagcggcggcgga
aacagccgctgggtggaagaggcctgcactgatggagactggtccaaaccaacacccctc
aatgagcgacttgaacatgagttgttctccggcagcaacactgggattaattttgagaaa
tatgatgacattcctgttgaggccactggacagaattgccctcatcacatcgagagtttc
caggacatagacatgggtgagattatcatgggcaacattgcgctgagccgctacacccga
ccaacccctgtccagaaatatgccattccaatcgtcaagtccaagcgagacctcatggcc
tgcgcacagacaggttctgggaagacagcggcattcctgctgccagttctcagccaaatc
tacgccgagggaccaggagatgctctgaatgcagcgaaagcctctgggcaggagaatgga
aaatatggccgtcgcaagcagtaccccatttcgctggtccttgcccctactcgagagcta
gctctacagatatatgatgaagccaggaagttttcataccgatccagagtccgcccctgt
gtcgtgtatggcggagcagatattggccagcagatccgagatctcgagagaggatgtcac
ctactggtggctaccccgggaagactcgtggacatgatggagaggggcaagattggacta
gactactgcaagtaccttgtcctggatgaagcggatcgcatgctggacatgggctttgag
cctcagatacggcgcatcgttgaacaggacaccatgcctccgaaaggcaaccggcagacc
atgatgttcagcgccacctttcccaaagaaatacagatcctggccagggatttcctggat
gactacatcttcctggcagtgggacgagtgggctccacctcagagaacatcactcagaag
gtggtttgggtggaagagagcgacaagaggtcttttctcctggacctgctcagtgccaca
gtcatccccagcgaagtgcaggacaatgctggagagaacatggagaagcctggcaaggac
tcactgactctggtttttgtggagaccaaaaaaggcgcagacgccttggaggacttcctg
taccgggaaggttacgcctgcaccagcatccacggcgatcgttcccagagggaccgagag
gaggccctgaaccagtttcgatctggaaagtgccccatcctggtggctactgctgttgca
gctcgtggtcttgacatctccaatgtgaaacatgttattaacttcgacctgccaagtgac
attgaagagtatgttcaccgcattggacgcacaggacgagtaggaaacctgggactggcc
acctcgttcttcaacgacaagaatgggaacatcacgaaagacctactggacatcctggtg
gaagccaaacaggaagttccttcatggctcgagagcctggcttatgagcaccagcataag
agcagcaaccgcggacgctctaagaggttcgctggtggttttggagcgcgtgactatcgt
cagacggccgccggaggcaacgccggaggctttggagcgcgcggtgttcggaaccaagtg
ggacatggaggagcccgtggctttgcagcaggtggctttggaaccttctacacaagcgac
ggctacggcggcaactactcacattctcaagtcgactggtggggcaactag
DBGET
integrated database retrieval system
