Halomonas campaniensis: FF32_01495
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Entry
FF32_01495 CDS
T03198
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
hcs
Halomonas campaniensis
Pathway
hcs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FF32_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcs03021
]
FF32_01495
Transcription machinery [BR:
hcs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FF32_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
KASH_CCD
Motif
Other DBs
NCBI-ProteinID:
AIA73557
LinkDB
All DBs
Position
complement(326848..328704)
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AA seq
618 aa
AA seq
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MAGNAQQQSRLKELIARGKEQGYLTYAEVNDHLPEDIADPDQVEDIIGMINDMGISVVEE
APDEDTLMMSDHSTDESAAEEAVAALAAVESDVGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEEGTREVMSALAYLPGAVASILDAYDATQDEEAPGRLSDLFSGFIDPDEGIPGVA
EAEVPEPEPEAELSDDDDLDSDGDDEDDDSTASEGGPDPEEAKARFEQIREQNAAVEAAL
AKYGRGSAELKSEQSRLAELFSPIKLVPKHFERLVGQVRISVEQVRAQEKAVMQLCVKKA
KVPRKTFIKSFPGYESNPKWLDTFQEAQPKYADRLEPLRADIARSQRKIAFEEDMVQLTV
ADLKEVNRKLSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRQMLQEMG
REPTPEELGERLEMPEDKVRKVLKIAKEPISMETPIGDDDDSHLGDFIEDGTMLLPIDMA
TGEGLIEATRNVLGGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEPLRSFLDE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaatgcgcagcagcagtcacgtctgaaggagttgatcgcgcgcggcaaggaa
cagggctacctgacctatgccgaggtcaacgaccatctacccgaggatatcgccgacccg
gatcaagtggaagacatcattggcatgatcaacgacatgggtatcagtgtcgttgaagaa
gcgccagatgaagacactttgatgatgtcggatcactccacggacgagtccgctgcggaa
gaggccgtcgcggcactcgccgccgtggaaagcgacgtcggtcgcactaccgaccctgtg
cgcatgtacatgcgcgaaatgggtacggttgaacttctaacccgcgaaggtgagatcgaa
atcgccaagcggatagaagagggcacgcgggaagtgatgtcagcgctggcgtatttgcct
ggcgctgttgcttctatcctggatgcctacgatgccacgcaggatgaagaagcgcctggt
cgcttgtctgatctgttctctggctttatcgaccccgacgaggggattccaggcgttgca
gaagccgaagtgcccgagcctgagccggaagccgagttgagcgatgatgatgatctcgac
agcgacggtgacgacgaagacgacgacagcactgccagcgaaggcggccctgatccggaa
gaagcaaaagctcgtttcgaacaaattcgtgagcagaacgccgctgttgaagctgcgttg
gcgaaatatgggcgtggtagcgcggagcttaaaagtgagcaatcgcgtttagccgagctg
ttttcgccgattaagctggtgccgaagcattttgagcgtctggttggccaagtacgtatt
agcgttgagcaggtgcgtgcccaagaaaaagcggttatgcagctgtgcgtgaagaaagct
aaagtaccgcgcaaaaccttcattaagtcgttccctggatacgagtctaatccaaaatgg
ttggacaccttccaggaagcgcagcccaagtatgctgaccgtcttgagccactgcgtgcc
gatattgctcgttcgcagcgcaaaattgcctttgaggaagacatggtgcagctcactgtg
gccgacctcaaggaagttaaccgcaagctctctatcggcgaggcgaaagcacgtcgtgct
aagaaagagatggttgaggctaacctgcgtttggtaatttcgattgcgaagaaatacacc
aaccgtggcctgcagttcctggatctaatccaagaaggcaacattggcttgatgaaagcg
gttgataagttcgaatatcgccgtggttacaagttctcgacctatgccacatggtggatt
cgtcaggcgattacgcgctctatcgctgaccaggcacgcaccatccgtattccggtgcac
atgattgagacgatcaataagctcaatcgtgtttctcgtcagatgctgcaggaaatgggc
cgcgagccaacgccggaagagctgggcgaacgcctggaaatgccggaagacaaagtacgc
aaagtgctaaaaattgccaaagagccgatctctatggagacgccgattggtgatgacgac
gattcgcacttaggtgactttatcgaagacggcactatgctattgccgattgatatggcc
accggcgaaggcttgatcgaagcaacgcgtaacgtccttggcggcttaaccgcacgtgaa
gcgaaagtgctgcgcatgcgtttcggtatcgatatgaataccgaccacacgctagaagaa
gtgggtaagcagtttgacgttactcgcgagcggattcgtcagatcgaagctaaggcgctg
cgcaagctacgccatccgagtcgctctgagccgctgcgctcattcctcgacgagtga
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