KEGG   Halomonas campaniensis: FF32_01495
Entry
FF32_01495        CDS       T03198                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03086  RNA polymerase primary sigma factor
Organism
hcs  Halomonas campaniensis
Pathway
hcs02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hcs00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FF32_01495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hcs03021]
    FF32_01495
Transcription machinery [BR:hcs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FF32_01495
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 TMPIT KASH_CCD
Other DBs
NCBI-ProteinID: AIA73557
LinkDB
Position
complement(326848..328704)
AA seq 618 aa
MAGNAQQQSRLKELIARGKEQGYLTYAEVNDHLPEDIADPDQVEDIIGMINDMGISVVEE
APDEDTLMMSDHSTDESAAEEAVAALAAVESDVGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEEGTREVMSALAYLPGAVASILDAYDATQDEEAPGRLSDLFSGFIDPDEGIPGVA
EAEVPEPEPEAELSDDDDLDSDGDDEDDDSTASEGGPDPEEAKARFEQIREQNAAVEAAL
AKYGRGSAELKSEQSRLAELFSPIKLVPKHFERLVGQVRISVEQVRAQEKAVMQLCVKKA
KVPRKTFIKSFPGYESNPKWLDTFQEAQPKYADRLEPLRADIARSQRKIAFEEDMVQLTV
ADLKEVNRKLSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRQMLQEMG
REPTPEELGERLEMPEDKVRKVLKIAKEPISMETPIGDDDDSHLGDFIEDGTMLLPIDMA
TGEGLIEATRNVLGGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEPLRSFLDE
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggctggaaatgcgcagcagcagtcacgtctgaaggagttgatcgcgcgcggcaaggaa
cagggctacctgacctatgccgaggtcaacgaccatctacccgaggatatcgccgacccg
gatcaagtggaagacatcattggcatgatcaacgacatgggtatcagtgtcgttgaagaa
gcgccagatgaagacactttgatgatgtcggatcactccacggacgagtccgctgcggaa
gaggccgtcgcggcactcgccgccgtggaaagcgacgtcggtcgcactaccgaccctgtg
cgcatgtacatgcgcgaaatgggtacggttgaacttctaacccgcgaaggtgagatcgaa
atcgccaagcggatagaagagggcacgcgggaagtgatgtcagcgctggcgtatttgcct
ggcgctgttgcttctatcctggatgcctacgatgccacgcaggatgaagaagcgcctggt
cgcttgtctgatctgttctctggctttatcgaccccgacgaggggattccaggcgttgca
gaagccgaagtgcccgagcctgagccggaagccgagttgagcgatgatgatgatctcgac
agcgacggtgacgacgaagacgacgacagcactgccagcgaaggcggccctgatccggaa
gaagcaaaagctcgtttcgaacaaattcgtgagcagaacgccgctgttgaagctgcgttg
gcgaaatatgggcgtggtagcgcggagcttaaaagtgagcaatcgcgtttagccgagctg
ttttcgccgattaagctggtgccgaagcattttgagcgtctggttggccaagtacgtatt
agcgttgagcaggtgcgtgcccaagaaaaagcggttatgcagctgtgcgtgaagaaagct
aaagtaccgcgcaaaaccttcattaagtcgttccctggatacgagtctaatccaaaatgg
ttggacaccttccaggaagcgcagcccaagtatgctgaccgtcttgagccactgcgtgcc
gatattgctcgttcgcagcgcaaaattgcctttgaggaagacatggtgcagctcactgtg
gccgacctcaaggaagttaaccgcaagctctctatcggcgaggcgaaagcacgtcgtgct
aagaaagagatggttgaggctaacctgcgtttggtaatttcgattgcgaagaaatacacc
aaccgtggcctgcagttcctggatctaatccaagaaggcaacattggcttgatgaaagcg
gttgataagttcgaatatcgccgtggttacaagttctcgacctatgccacatggtggatt
cgtcaggcgattacgcgctctatcgctgaccaggcacgcaccatccgtattccggtgcac
atgattgagacgatcaataagctcaatcgtgtttctcgtcagatgctgcaggaaatgggc
cgcgagccaacgccggaagagctgggcgaacgcctggaaatgccggaagacaaagtacgc
aaagtgctaaaaattgccaaagagccgatctctatggagacgccgattggtgatgacgac
gattcgcacttaggtgactttatcgaagacggcactatgctattgccgattgatatggcc
accggcgaaggcttgatcgaagcaacgcgtaacgtccttggcggcttaaccgcacgtgaa
gcgaaagtgctgcgcatgcgtttcggtatcgatatgaataccgaccacacgctagaagaa
gtgggtaagcagtttgacgttactcgcgagcggattcgtcagatcgaagctaaggcgctg
cgcaagctacgccatccgagtcgctctgagccgctgcgctcattcctcgacgagtga

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