Halomonas campaniensis: FF32_01620
Help
Entry
FF32_01620 CDS
T03198
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hcs
Halomonas campaniensis
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcs03016
]
FF32_01620
Enzymes [BR:
hcs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FF32_01620
Transfer RNA biogenesis [BR:
hcs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FF32_01620
Prokaryotic type
FF32_01620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIA73582
LinkDB
All DBs
Position
complement(352144..353184)
Genome browser
AA seq
346 aa
AA seq
DB search
MLNLPAWQRCLDAEFGAPSPGCYRVQPEDFVVDEQLDFTPENHGEHLWLRLEKRHQTTLD
VVKSVSRLCSVTLRDVGYSGMKDRVAVTRQWLSVHLPGREAPSDLSESLAAVGITVLAQA
RHPRKLKRGVHRTNHFTLRLSGEALQHPNFFDRWEALCRHGVPNYFGPQRFGPEGRNLQR
AEALLAKGWRKRDDRQGMMLSTARSFLFNELLSERLTDGTWCQPLAGDMLMLDGTHSVFT
VDAVDDDLIGRAAALDIHPTGALWGVGELAEYQVADYEKRLLACHPMLCEGLVKSGVKRS
HRALRARLISPSIEILPNAVVLSFALPRGSFATAVVSELIAHPDFA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacttacccgcttggcaacgctgcttagatgccgagttcggtgcccctagtcca
ggttgctatcgcgttcagccagaagattttgtcgtcgacgagcagctggactttacgcct
gaaaatcatggtgagcacctgtggttacgtcttgaaaagcgccatcaaaccacgttagat
gtggtaaaaagcgtcagccgcctttgtagtgtcacacttcgagatgtgggctactccggg
atgaaggatcgtgtcgcagtgacgcggcagtggttaagcgtgcatttgcccggacgcgag
gcgccaagtgatttgagcgaatcattagcggcagtgggtattacggtgttggcccaggca
aggcatccccgaaaactcaaacgcggtgtccatcgcacgaaccactttaccttgcggctt
agtggtgaagcgcttcaacatccgaatttttttgaccgctgggaggcgctttgtcgccac
ggtgtgcctaactattttggaccccagcgttttggtcctgaagggcggaatttacagcgt
gcagaagctcttctagctaaaggttggcgcaagcgagatgatcgccaaggcatgatgctt
tccaccgcgcgtagcttcttgtttaacgagttgctgagcgagcgtttgacggatggaacg
tggtgccagccgctagcgggcgatatgctgatgctggatggcacacacagtgtgtttacc
gttgatgccgttgacgacgacttgatcggtcgtgccgctgcgcttgatattcatccaacc
ggtgccctgtggggtgtcggggaactcgctgagtatcaagtggctgactacgaaaaacgg
ctgttagcgtgccatccaatgctgtgcgagggattggtgaaaagcggtgtgaaacgctcc
catcgggcgctgcgagcaaggttaatttcgcctagtatcgagatattacctaatgccgtg
gtactctcatttgccttaccacggggaagttttgccacggcggtggtgagtgagttaatt
gctcatccggattttgcttaa
DBGET
integrated database retrieval system
