Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0210
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Entry
HDEF_0210 CDS
T00911
Name
(GenBank) conserved hypothetical protein, Radical_SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00790
Folate biosynthesis
hde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
HDEF_0210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hde03016
]
HDEF_0210
Enzymes [BR:
hde01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
HDEF_0210
Transfer RNA biogenesis [BR:
hde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HDEF_0210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ACQ66978
UniProt:
C4K335
LinkDB
All DBs
Position
complement(216583..217254)
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AA seq
223 aa
AA seq
DB search
MLYPINEIFQTLQGEGHFMGTPAIFIRLQGCPVGCSWCDTKHTWEKKNEQQVDLFSILQK
KTANDFWSHSGEQNLLAVIRAQGYQASHVVITGGEPCLYDLTPLTQLLEQEGYFCQIETS
GTHLVHCTPSCWVTVSPKINMRGGFKIQHQALERADELKHVVARKSDIETLDALIGNLKD
RKKRIISLQPVSQKKSATQLCIDTCIERNWRLSVQMHKYLGIE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctttaccctattaatgaaatatttcagacgttacaaggagaaggccattttatgggc
actcccgccatttttattcgtttgcaaggttgccctgtgggttgtagctggtgcgacact
aaacacacttgggagaaaaaaaacgagcagcaagtggatttattctccatattacaaaaa
aaaacagcgaatgatttttggagtcatagcggcgaacagaacctattggccgtcattcgt
gcacaaggatatcaagcttctcacgttgtgatcacagggggtgaaccctgtctctatgat
ttgacgcctttaacacaactgttagaacaagaaggctatttttgccaaattgaaaccagt
ggcactcatctcgtacactgcaccccttcttgctgggtgacggtttccccgaaaatcaat
atgcgaggagggttcaaaatacagcatcaggctttggagagagcggatgaattaaagcat
gtggttgctcgaaagagtgacattgagacgttagatgctttaatcggcaatttaaaagat
cgtaaaaaaagaatcatcagtttacagccggtcagccaaaaaaaatcagcgactcaactt
tgtattgacacctgtattgagcgtaattggcgcttatccgtacaaatgcataaatattta
ggtattgaatag
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