Hartmannibacter diazotrophicus: HDIA_4117
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Entry
HDIA_4117 CDS
T05217
Symbol
ldc_2
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi00330
Arginine and proline metabolism
hdi00480
Glutathione metabolism
hdi01100
Metabolic pathways
hdi01110
Biosynthesis of secondary metabolites
hdi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HDIA_4117 (ldc_2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HDIA_4117 (ldc_2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HDIA_4117 (ldc_2)
Enzymes [BR:
hdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HDIA_4117 (ldc_2)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
SON57658
UniProt:
A0A2C9DBZ8
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Position
1:complement(4464089..4465219)
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AA seq
376 aa
AA seq
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MTARIREFLDTRRPDGPCLVVDLDVVRDNFLAFRHALPDSRVFYAVKANPAPEVLSLLAE
LGSNFDCASVAEIEMALAAGADATRISFGNTIKKERDVSRAFHLGVRLFAVDCVAEVEKV
ARQAPGARVFCRILCDGAGAEWPLSRKFGCEPEMAIDVLETAHRLGLTAYGVSFHVGSQQ
ANTEAWDGALASAANIFRVLGERGIQLKMVNLGGGFPTKYLKDIPAVEAYGRSIDASIRQ
HFGNRIPETIIEPGRGMVGNAGIIKTEVVLISQKGGADDTRWVFLDIGKFGGLAETMDEA
IRYPMVTRRDSDEKTPCILAGPTCDSADVLYEKTPYALPVSLEIGDEILIEGTGAYTTTY
SAVAFNGFEPLKAYVI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgcattcgcgaattcctcgacacccgacgtcccgacggcccttgcctcgtg
gtcgacctcgacgtcgtgcgcgacaatttccttgccttccgccatgcgctgcccgacagc
cgcgtcttctacgcggtcaaggcgaaccctgcgcctgaagtgctttcgctgctcgccgaa
ctcggctcgaacttcgactgcgcgtccgtggccgagatcgagatggcgctggccgccggc
gcggatgcgacccgcatttccttcggcaacacgatcaagaaggagcgtgacgtttcgcgc
gccttccatctcggcgtgcgcctcttcgccgtcgactgtgtcgccgaggtcgagaaggtc
gcccgtcaggcgccgggcgcgcgcgtcttctgccgcatcctgtgcgatggcgcgggcgcc
gaatggccgctcagccgcaagttcggctgcgagccggagatggcgatcgacgttcttgag
acggctcatcgtcttggcctgacggcctacggcgtctcgttccacgtcgggtcgcagcag
gccaacaccgaggcctgggacggcgcgctggcgtcggccgcgaacatcttccgcgtcctc
ggcgagcgcggcatccagctcaagatggtcaacctcggcggcggtttcccgacgaagtac
ctgaaggacatcccggcggtcgaggcctatggccgttcgatcgacgcctcgatccgccag
cacttcggcaaccgcattccggagacgatcatcgagccgggccgcggcatggtcggcaac
gccggtatcatcaagaccgaggtcgtgctgatctcgcagaagggcggcgcggacgacacg
cgctgggtcttcctcgacatcggcaagttcggcggtctcgccgagacgatggacgaggcg
atccgctacccgatggtcacccgacgagacagcgacgagaagacgccgtgcattctcgcc
ggcccgacctgcgacagcgccgacgtgctctacgagaagacgccctacgcgctgcccgtc
tcgctggagatcggcgacgagatcctgatcgaaggcaccggagcctacaccaccacctat
tcggcggtggcgttcaacggcttcgagcctctgaaggcctacgtgatctga
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