Halobacterium sp. DL1: HALDL1_06490
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Entry
HALDL1_06490 CDS
T03878
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hdl
Halobacterium sp. DL1
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdl03016
]
HALDL1_06490
Enzymes [BR:
hdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HALDL1_06490
Transfer RNA biogenesis [BR:
hdl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HALDL1_06490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Arm
Motif
Other DBs
NCBI-ProteinID:
AHG05209
LinkDB
All DBs
Position
complement(974531..975169)
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AA seq
212 aa
AA seq
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MTSYWDERHEMSVDPTTDADVADQNGVRHLVFLARVDDESVRETLRPTLDALSEFDCLAV
VPEQYLHVTVTIAGNVGSGQRLSEHEEERVAAAGRTAFADASAFEVTFPQLDLFPSVVFA
SVDDGGSFEGLNERACGIDGIEVHGRDEGYVPHLTLAQFRSRDEYEDLLAWLESNRSLEA
PSTRVTDVDLVAVDRDERFPEFETVARYPLAH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcctactgggacgaacgccacgagatgtccgtggaccccacgactgacgcggac
gtcgccgaccagaacggcgtccgccatctcgtcttcctcgcgcgcgtcgacgacgagagc
gtccgcgagacgctgcgcccgacgctcgacgcgctgtcggagttcgactgtctcgccgtc
gtccccgagcagtacctccacgtgacggtgaccatcgccgggaacgtcggctccggtcag
cggctctccgagcacgaggaggagcgcgtcgcggcggcgggccgaacggcgttcgcggac
gcgtcggcgttcgaggtgacgttcccgcagttggacctcttcccgtccgtggtgttcgcg
tcggtggacgacggcgggtcgttcgagggcctgaacgagcgggcgtgtggtatcgacggc
atcgaggtccacggccgcgacgaggggtacgttccgcacctcacgctcgcgcagttccgg
tctcgcgatgagtacgaggacctcctcgcgtggctggagagcaaccggtcacttgaggcg
ccgtcgacgcgagtgaccgacgtcgacctggtggcggtcgaccgcgacgagcgattcccg
gaattcgagacggtggcgcggtatccactcgcccactga
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