Hyphomicrobium denitrificans 1NES1: HYPDE_33818
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Entry
HYPDE_33818 CDS
T02646
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdt03032
]
HYPDE_33818
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_33818
Enzymes [BR:
hdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYPDE_33818
DNA replication proteins [BR:
hdt03032
]
Prokaryotic type
DNA Topoisomerases
HYPDE_33818
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYPDE_33818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
AGK58436
UniProt:
N0BD35
LinkDB
All DBs
Position
complement(2231697..2234522)
Genome browser
AA seq
941 aa
AA seq
DB search
MLQAIFPRQRRSALQPRFASKKDETLTDNSDDERPAGREPSDIRPVSISEEMKKSYLDYA
MSVIISRALPDVRDGLKPVHRRILFAMNELGLDWNKKYVKSARIVGEVMGKYHPHGNLAI
YDALVRLAQDFSMRVPLVDGQGNFGSIDGDPPAAERYTESRLAKIASFLLDDLDNDTVDY
RDNYDGTIQEPSVLPAKFPNLLVNGAGGIAVGMATNIPPHNLGEVIDACIADLDNPEIGI
DELSQIVQGPDFPTAGLILGRGGILSAYHKGRGSIIMRARVTVENIRKDREALVVTEIPY
QVNKRTLIEKIADLVRDKKIEGISDLWDESNREGIRIVIELKRDAVADVVLNNLYKYSDL
QTTFGANMLAINGGRPESLTLKDFISAFTSFRQDVVTRRIKHLLSKARDRAHVLVGLAIA
VANIDEVIKLIRYSSSPAEAKEQLMIRDWPAKDMIPLIELIADPRHTVSEAGAYRLSEEQ
AKAILELRLARLTALGRDEIADELNKIATEIREYLAILASRARVVEIVKGELQAIKDEFA
TPRKTEIVDIEGEVEDEDLIQREDCVVTVSHKGYIKRVPLAAYRAQRRGGKGRSGMSTRD
EDFVTQLFVTSTHTPVLFFSSRGMCYRMKVWRLPPASPQSPGKALVNLLPLSEGEAITSI
LPLPEDSSTWGDLELVFATRSGNVRRNALADFENIHRNGKIAMKLDEGDSIVQVAIAKPD
QDVLLTSADGQCIRFLIGDEVRLFKGRDSTGVRGIRLGDGDEVISMAILNHFEASAEERA
AYLKQANALRRSEETEDVETVADADAEDVSADAVTLSAERFAAMQAGEQFVLTVSSKGFG
KRSSSFEFRTSGRGGKGIVAMVVNERNGRLLASFPIDEKDQIMLVTDGGQLIRCPVDGIR
IAGRNTQGVRIFKTEAEEKVVSVERITEEDSDEEQNGNGES
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagccatcttcccgcgccagcgccgatctgcgctgcagccgcgatttgcctcc
aagaaagatgagactttgaccgacaatagcgacgacgaaagaccggctggccgcgagccg
agcgacatacgccccgtctccatctcggaggagatgaagaagtcgtatctcgactacgcg
atgagcgtcatcatctcgcgcgcgctgcccgatgtacgcgacggcctgaagcccgtgcat
cgccgcatcctgttcgcgatgaatgagcttgggctcgactggaacaagaaatatgtcaag
tcggcgcgcatcgtcggcgaggtgatgggcaaatatcacccgcacggcaacctcgcgatc
tacgacgcgctcgtccgcctcgcgcaggacttctcgatgcgcgtgccgctcgtcgacggg
cagggaaacttcggctcgatcgacggtgatccgcctgcagccgaacgctacacggaatcg
cgcctcgccaagatcgcgagcttccttctcgacgatctcgacaacgatacggtcgattat
cgcgacaactacgacggcaccattcaggagccgtcggttctgcctgcgaagttcccgaac
ctgctcgtcaacggcgccggcggcatcgccgtcggcatggcgacgaacattccgccgcat
aacctaggtgaggtcatcgatgcgtgcatcgccgatctcgacaatccggaaatcggcatc
gatgaactttcgcagatcgtccaaggcccggatttcccgaccgcgggtctcattctaggc
cgcggcggcattctttccgcctatcacaaggggcgcggctcgatcatcatgcgtgcgcgc
gtgacggtcgagaacattcgcaaggaccgtgaagcgctcgtcgtcaccgaaattccctat
caggtgaacaagcgtacgctgatcgagaagatcgcagatcttgtacgcgacaagaagatc
gaaggtatttccgacctctgggacgaatcgaaccgcgaaggcatccgcatcgtcatcgag
ttgaagcgcgatgcggtcgccgatgtcgttctgaataacctctacaagtattccgatctg
cagacgacgttcggcgccaacatgctggcgatcaacggcggccgcccggaaagcctgacg
ctgaaggacttcatctcggcgtttacgagcttccgccaggacgtcgtcacacggcgcatc
aagcatctgttgagcaaggcacgcgaccgggctcacgtccttgtcggtctggcaatcgcc
gttgccaacatcgacgaggtgatcaagctcatccgctattcgtcatcgcctgccgaagcc
aaagagcagttgatgatccgcgattggccggcgaaggacatgatcccgttgatcgagctg
atcgccgatccgcgccatactgtgtcggaagcaggggcctaccggctttcggaagagcag
gcgaaagccattctggaattgcgcctcgctcgcctgaccgctctcggccgggacgaaatc
gccgatgaattgaacaagatcgcaaccgaaatccgcgaataccttgcgatcctggcgtcg
cgcgcccgcgtcgtcgagatcgtcaagggcgagcttcaggcgatcaaggacgagttcgcg
acaccgcgcaagaccgagatcgtcgatatcgaaggcgaggtcgaggacgaggatctgatc
cagcgcgaggattgcgtcgtcaccgtcagccacaagggctacatcaagcgcgtgccgctc
gccgcctatcgggcgcagcggcgcggcggcaagggtcgctccggaatgtcgacgcgggac
gaggatttcgtcacgcagctcttcgtgacgtcgacgcacacgccggtgctgttcttctct
tcgcgcggcatgtgctaccgcatgaaggtctggcgcttgccgcccgcatcgccgcagtct
cccggcaaggcgctcgtcaacctgttgccgctctccgagggcgaggcgatcacgtcgatt
cttccgttgccggaggattcctcgacctggggtgacctggagctggtcttcgcgacgcgc
tcgggcaacgtacggcgcaacgcgctggctgattttgagaatatccatcgcaacggcaag
atcgcgatgaagctcgacgaaggcgacagcatcgtgcaggtcgcgatcgccaagcccgat
caggatgtactgctgacgagcgccgacggccagtgcatccgcttcctcatcggcgacgaa
gtccgtctcttcaagggccgcgactcgaccggcgtgcggggcatcaggctcggcgacggc
gacgaggtcatctcgatggcgatcctcaatcacttcgaagcctcggccgaagagcgcgcc
gcctacctgaagcaggcgaacgccctgcgccgctcggaagaaaccgaggacgtcgagacg
gtcgccgatgccgacgcagaggatgtcagcgccgacgccgtgacgctcagtgccgaacgg
ttcgcagcgatgcaggcaggcgagcagttcgtgttgacggtttcgagcaagggcttcggc
aagcggtcgtcgtcgttcgaattccggacctctggccgcggtggcaagggcatcgttgcg
atggtcgtcaacgagcgcaacggccgcctgctagcgtccttcccgatcgacgaaaaggac
cagatcatgctcgtcaccgacggtggccagttgattcgctgcccggtcgacggcatccgg
atcgcggggcgcaacacccaaggcgtgcgcatcttcaagacggaagccgaggagaaagtc
gtctccgtcgagcgcatcaccgaggaagactccgacgaggagcagaacggcaacggcgaa
agctaa
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