Hyphomicrobium denitrificans 1NES1: HYPDE_34208
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Entry
HYPDE_34208 CDS
T02646
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_34208
Enzymes [BR:
hdt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HYPDE_34208
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HYPDE_34208
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
TPR_2
TPR_12
Motif
Other DBs
NCBI-ProteinID:
AGK58513
UniProt:
N0B6A6
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All DBs
Position
2297206..2299407
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AA seq
733 aa
AA seq
DB search
MATPNLFRAGALRSVAACWLTAVALVTGSPVFADSPLREVPAPRPLPEEQRQLEKLGSAL
APLLSAEPSANDVKNLQEAVAAVGAQDVGRFNTAKSSISDPIARKLADWIRLRAGLGDPA
EYETFLKDDPLWPSRAMLIQRLEEALFMKGGSSRAIKSYFASEGPQTGAGYAALASAYLA
EGNTAKARSLAAKTWRELTLPPTLENGFVARFGKLLTADDHKWRFDRLVTDDVRYADNRA
ARVAAARRLIPLLPQSERKKATARLAVFDKAANAHVLMSALDKHGEGDAGLIFHRAQMLR
KAGKIEEASDLILSVPADPKKIAELDEWWAERRELAYGALKLGKMKLAYRLTRDAGPLTV
NPLKEQTFMAGWIAFRYLNNIDAAEKHFRAMAAAADGPLSNAKAQYWLGRVADARGDKAG
AAKHYRLAAQNTDTFHGLLAMQMLQPGRTSLEIKPPTYPSPEQIRKFMSDDATKALILAA
KAKLSRLYTRSFLVALHSATSSEAEAGMVAYVARAIGDPQMSLRIGKVAVAKGQNLLTYA
YPVTAFPGYKPLRKPPELALLLGLARQETEFDSQIVSGAGAKGLLQLMPGTARHVCRDYK
IKCQIPRLLSDTRYNVTLASAYIADRMDDFDGSYVLGLTGYNAGPGRARQWISENGDPRD
PRVDTVDWIERIPITETRDYVTKVLANIQIYRARLGDTKNALRLQQDLVRAPDHPKTRDS
SQTHTSTASDNEG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacgccaaatctctttcgtgccggtgctttgaggagcgtcgcggcatgctggctc
accgccgtggcgcttgtcacgggatcgcctgttttcgccgactcacccctgcgcgaagtc
cctgctccgcgcccccttcccgaggagcagaggcagcttgaaaagctcggctcggcgctt
gcaccccttttgtcggcagagccatccgccaacgacgtcaaaaacctgcaagaggctgtc
gcggccgtcggtgctcaggatgtcggtcgcttcaacactgcgaaaagcagcatttcagac
cctattgcacggaagcttgccgattggatacggctccgcgccgggcttggagacccggcg
gaatacgagacttttctgaaagacgatcctctctggccctcccgcgcaatgctcattcaa
cggctggaagaggcgctctttatgaaaggcggcagctcgagggcgatcaaaagctatttc
gcaagcgagggaccgcagaccggcgccggctacgcggccctcgcatccgcctatctcgcg
gaaggcaataccgccaaagcgcgatctcttgccgctaaaacatggcgggagttgacgctt
ccgccgacgttggagaacggctttgttgcgcgcttcggcaagctcttgacggctgacgac
cacaaatggcgtttcgatcggcttgtgacggacgatgtccgctatgcggataatcgcgcc
gcgcgggtcgctgctgcgcgccgcctcattccgcttctgccgcagtcggaacggaaaaag
gcgaccgcccggctggccgttttcgacaaggctgcgaacgcccatgtgttgatgagcgcg
ctcgacaagcatggggaaggcgatgccggactgatcttccatcgcgcccagatgctgcgc
aaggccgggaagatcgaggaagcgagcgacctcattctttccgtccctgctgaccctaaa
aagatcgcggagcttgacgagtggtgggcggagcgccgcgagctggcttatggcgcgctg
aagcttggcaaaatgaagctcgcctaccggcttaccagagacgccggcccgctgacggtc
aatccgctcaaagaacagacattcatggcggggtggattgcctttcgctatctgaacaat
atcgatgcggctgaaaaacattttcgcgccatggcagcggccgccgacgggccgctcagc
aatgcgaaagcgcagtattggcttgggcgcgtggcggatgcgcgcggcgacaaggccggt
gccgcgaagcactatcggcttgccgcacagaatacagataccttccatggtctgcttgcc
atgcagatgctgcagccggggcgcacgtcgctcgaaatcaagccgcccacctacccgtcg
cctgaacaaatccgaaagttcatgtcagacgacgcgacaaaggctttgattttggcagct
aaggctaagctctcacgtctttacacgcggagtttcctcgtcgccctgcattccgcaacg
tccagcgaagccgaagccgggatggtggcttacgtcgcacgcgcgattggtgatccgcag
atgtcgttgcgtatcgggaaggtcgctgtcgccaagggacagaacctgttgacgtacgct
tatcccgtcacggccttccctggctataagccgctgcgcaagccgcccgagctcgccctt
ctgctcggccttgcgcgccaagagaccgagtttgactcgcagatcgtctccggcgccgga
gccaagggtcttctccagctcatgccgggcacggcgcgccatgtctgccgcgattacaaa
atcaaatgccagattccgcggctgctctccgatacacgctacaacgtcaccttggcatca
gcctatatcgccgaccgcatggatgacttcgacggttcgtatgtgctggggctgacgggc
tacaatgccggccccgggcgcgctcggcaatggatcagcgaaaacggtgatccccgcgat
ccacgagtcgataccgttgattggatcgaacgcatcccgatcaccgagacacgcgattat
gtcaccaaggttctggcgaacatccaaatttaccgtgcgcgcctcggcgacacgaagaac
gcgctacgcctgcagcaggatctcgtccgggcaccggaccatccgaagactcgggacagc
agtcaaacgcacacaagcacagccagcgacaacgagggctaa
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