Herbaspirillum sp. meg3: hmeg3_18920
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Entry
hmeg3_18920 CDS
T05024
Name
(GenBank) lipid A core--O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00540
Lipopolysaccharide biosynthesis
hee01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
hmeg3_18920
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hee01005
]
hmeg3_18920
Enzymes [BR:
hee01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
hmeg3_18920
Lipopolysaccharide biosynthesis proteins [BR:
hee01005
]
Core region
hmeg3_18920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Phage_holin_8
Motif
Other DBs
NCBI-ProteinID:
ASU40154
UniProt:
A0A223PDP1
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Position
complement(4201858..4203075)
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AA seq
405 aa
AA seq
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MNRFTSFAVFLYSAISLIVPSGFSIGSGFLVLGSLMLLRKRDVPLNREDKLLMAVFFFYF
VVSVGMNILHGEIIKEYDLPLRFLLAIPALMLLRAYPPSPACFWAGLGIGGILAGLYAGW
QNLFVLHARAGGHTNQIQYGNISFIIGILCLTGIGWAMQQKNSRKWVIFLLCGFVMGMLG
SLFTGSRGSWVGLPFCLYIMYRCYGGEVSKRYVWAGIAFVVVAIAVAYAIPRTQLKARTE
LAISESVTYLKVRNAETSIGTRMEMWRAGAMAAVERPLLGWGKAGFVDWESAAIDAGRVH
PFMRENNHVYNEWLDAEVKRGILGLIALLALYAVPMRMFIRHLKTAGKAAKPYAIGGIIL
IVNYICFGFSQVFLAHNTGVMTLAFTTVILWGLLRGEETKESLQN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatttacctcctttgccgtttttctttattcggccatttcgttgattgttccc
agtggtttttccatcggctccggtttccttgtactcggcagcctgatgctgttaagaaaa
cgcgacgtccctctgaatcgtgaagacaagctgttgatggcagtgtttttcttctatttc
gtggtctcggtcggcatgaatattctgcacggcgaaatcatcaaggaatacgacttgccc
ttgcgcttcctgctggcgattcctgcgctgatgctgttgcgggcatacccgccgtctcct
gcctgcttctgggccggcttgggtattggcggtattctggcgggactgtatgcgggctgg
caaaacctgttcgtgcttcatgcacgcgccggcggtcacaccaaccagatccaatacggc
aatatcagcttcatcatcggtatcttgtgcctgacaggtatcggctgggcgatgcagcag
aaaaattcgcgcaagtgggtcatcttcctgttgtgtggttttgtcatgggcatgcttggt
tccctgttcacgggaagccgcggcagctgggtcggtttgccgttctgcctctacatcatg
tatcgctgctatggcggtgaagtcagcaagcgctatgtatgggcaggtatcgcattcgtg
gtagtcgccatcgcagtggcttatgcgattccacgcacccagctcaaggcaagaaccgaa
ctggcgatcagcgaaagcgtcacctacctgaaggtccgcaatgccgagacatcgatcggc
acgcgcatggagatgtggcgtgcaggagctatggcagcagtcgagcgcccgctactggga
tggggcaaagccggctttgtggattgggaatccgctgcaattgacgccggccgggtgcat
ccgttcatgcgcgaaaacaaccacgtctacaacgaatggctggatgcggaagtcaaacgt
ggcatcttgggcctgatcgcattactggccttgtatgcagtgccgatgcgcatgttcatc
aggcatctcaaaactgccggtaaagctgccaagccttacgcaattggcggcatcatactg
atcgttaattacatctgcttcggtttttcgcaagtgttccttgcgcataataccggcgtg
atgacgctggcgttcacgaccgtgattctgtggggactgttgcgaggggaagagacgaaa
gaaagcctgcagaactga
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