Herbaspirillum sp. meg3: hmeg3_22000
Entry
hmeg3_22000 CDS
T05024
Definition
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00473
D-Alanine metabolism
hee00550
Peptidoglycan biosynthesis
hee01100
Metabolic pathways
hee01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00473 D-Alanine metabolism
hmeg3_22000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
hmeg3_22000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
hmeg3_22000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hee01011
]
hmeg3_22000
Enzymes [BR:
hee01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
hmeg3_22000
Peptidoglycan biosynthesis and degradation proteins [BR:
hee01011
]
Precursor biosynthesis
Amino acid ligase
hmeg3_22000
SSDB
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
TTL
ATPgrasp_ST
CPSase_L_D2
Other DBs
NCBI-ProteinID:
ASU40711
UniProt:
A0A223PFK0
LinkDB
Position
complement(4880665..4881690)
AA seq
341 aa
MTDSNMAKQFGKVGVLFGGRSAEREVSLMSGEGVLKALRSKGVDAHPFDPAQRSLAELAA
EKFDRVFIALHGRYGEDGTLQGALEQLGIPYTGPGVMASSIAMDKVMTKRIWIGHDLPTP
RFIVLDSAATPREELRQVPDVLGLPLMLKAPHEGSTIGIAKVAGYSDMQEAFNLCAKYDA
AVLAEEFVTGRELTVPVLGKGRDAKAYPVIEIRAPEGNYDYQHKYFTDDTKYLCPAPIDE
ALTRRVQDLAEKAYNALGCRGWSRVDFMLRASDNEPFLLEINTSPGMTSHSLVPMSAKQA
GMSYEDLCCEILKSAALDLKPSDAWKPHASTDAGANVSDKG
NT seq
1026 nt
+upstream
nt +downstream
nt
atgacggactcgaatatggccaaacaattcggtaaggtcggcgtgctgttcggcggtcgc
tccgccgagcgcgaagtctcgctgatgtccggcgagggcgtgttgaaggccttgcgcagc
aagggtgtcgacgcacatcctttcgatccggcgcagcgcagcctggctgaactggctgca
gaaaaatttgatcgcgtctttatcgcgctgcacggtcgctacggcgaagacggtacgctg
caaggtgcgctggagcagctcggcattccttacaccggtcccggcgtgatggcgtcctcg
attgcgatggacaaggtcatgaccaagcgcatctggatcggccatgacttgccgacgccg
cgctttatcgtgcttgacagcgctgctacgccgcgcgaagagttgcgtcaggttcccgac
gtactcggtttgccgctgatgttgaaggcgccgcacgaaggttcgaccatcggtatcgcc
aaagtggcgggttattccgacatgcaggaggcattcaacctgtgcgccaaatacgacgct
gctgtgttggcggaagaatttgtcaccggccgcgaactgacggtgccggtgctgggcaaa
ggacgtgatgcaaaggcttatccggtaatcgagatccgcgcacccgaaggcaattacgac
tatcagcacaagtatttcaccgacgacaccaagtatctgtgcccggcgccgatcgacgaa
gccctgacgcggcgcgtgcaggatcttgccgagaaggcgtataacgcactcggttgccgc
ggctggtcgcgcgtggacttcatgctgcgcgcgtccgacaacgagccgttcctgctggag
atcaatacctcgccaggcatgaccagccattcgctggtgccgatgtcggccaagcaggcg
ggaatgagttacgaagatttgtgctgcgagattttgaaatccgcagcgctggatttgaag
ccgtccgacgcgtggaaaccgcacgcttcgaccgatgccggcgccaacgtttcggacaag
ggataa
DBGET
integrated database retrieval system