Helicobacter pylori F16: HPF16_0442
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Entry
HPF16_0442 CDS
T01910
Symbol
hsdM-1
Name
(GenBank) Type I restriction enzyme M protein
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hef02048
]
HPF16_0442 (hsdM-1)
Enzymes [BR:
hef01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
HPF16_0442 (hsdM-1)
Prokaryotic defense system [BR:
hef02048
]
Restriction and modification system (R-M system)
Type I R-M system
HPF16_0442 (hsdM-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
MTS
Eco57I
AviRa
Methyltransf_31
UPF0020
Methyltransf_25
Carbpep_Y_N
Motif
Other DBs
NCBI-ProteinID:
BAJ55039
LinkDB
All DBs
Position
complement(447537..449168)
Genome browser
AA seq
543 aa
AA seq
DB search
MPNNVLLQIKQNTLNLIDDLKVVCMSFGLGNDGNEYKIITQCFLYKFLCDKFEFLFEQEF
PNQTIQDYKDFNEEEKEDFFITLIDKRLPKLAYDDLLSYLFEKHFNDNDLHLKLDIIFNR
ISSNNAELFNTTSTDETTIALFESVSQYINEESKRANFTRVLLDKLKNFDFKQAFLNLQN
QQGYDFFAPIFEYLLKDYNNAGTGKYAEYYTPLSIASIIAKLLINEPTQSVKIYDPSAGT
GTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLKYAIEGNTLTNPYHSK
ECKGKMDYIVSNPPFKLDFSNEHAEISQNKNDFFLGVPNIPKNDKSKMPIYTLFFQHCLN
MLSNKGKGAIVVPTGFISAKSGIENKIVRHLVDEKLVYGVICMPSQVFANTGTNVSIIFF
KKTPSEDGVVLIDASKLGEEYTENKNKKTRLRGSDIDLILETFQNKTQKADFCALVSFDE
IIEKNYSLNPGQYFTIEDTSEKISQAEFENLMQQYSSELTSLFDESQSLQQEILETLGNL
NYD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcctaataacgttttattgcaaatcaaacaaaacaccctcaacctcattgatgattta
aaagtcgtttgcatgagttttggtttagggaacgacggcaacgaatacaagatcatcacg
caatgctttttgtataaattcttatgcgataagtttgaattcctttttgaacaagaattt
cctaaccaaacaatacaagattacaaagactttaacgaagaagaaaaagaagattttttt
attaccttaatagataaaagactccccaaactcgcctatgatgatcttttaagctatctt
tttgaaaaacattttaacgataacgatttacacctaaagctagatattatttttaatcgt
atttctagcaataatgccgagcttttcaacaccacaagcacggatgaaaccactatcgct
ttatttgaaagcgtctcacaatacattaatgaagagtctaaaagggctaattttactaga
gttttactggacaaactcaaaaattttgatttcaaacaagcttttttaaacctgcaaaac
cagcaaggctatgattttttcgcccctatttttgaatacttgctcaaagattacaataac
gctggcacaggcaaatacgccgaatactacacccctttaagcatcgctagcatcattgct
aagcttttaattaatgagccaactcaaagcgtcaaaatctatgacccaagcgcaggcaca
ggaacgcttttaatggcattagcccaccaaataggcacggattcttgcaccctttatgcc
caagacatttcgcaaaaatccttaaaaatgctcaaactcaacctcattttaaacgatttg
acccactctttaaaatacgccattgagggaaacactttaaccaacccctaccattctaaa
gaatgtaaagggaaaatggattacatcgtgagtaacccccctttcaagctagatttttcc
aacgagcatgccgaaatttcgcaaaacaaaaacgattttttcttaggcgtgcccaatatc
cctaaaaacgataaaagcaaaatgcccatttacacgctctttttccagcattgcttgaac
atgcttagcaataaaggtaagggggctatcgtcgtgccaaccggattcattagcgctaaa
agcgggatagaaaataagattgtcaggcatttagtggatgaaaagctcgtttatggggtg
atttgcatgcccagtcaagtttttgccaacaccggcactaatgtaagcatcatctttttt
aaaaaaacgccaagcgaagatggagtggttttgattgacgcttccaaactcggcgaagaa
tacaccgaaaacaaaaacaaaaaaacgcgcttaagagggagcgatattgatttgatttta
gaaacttttcaaaataaaacccaaaaagcggatttttgcgctctggtttcttttgatgaa
atcatagaaaaaaattattctctaaatcccgggcagtatttcactatagaagacacaagt
gagaaaataagccaagcagagtttgaaaacttaatgcaacaatattcaagcgaactgaca
agcctttttgatgaaagccagagcttgcaacaagaaattttagaaactttaggaaatctt
aattatgactaa
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