Helicobacter pylori F16: HPF16_0654
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Entry
HPF16_0654 CDS
T01910
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hef
Helicobacter pylori F16
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
HPF16_0654
Enzymes [BR:
hef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPF16_0654
Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPF16_0654
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
DUF5663
Motif
Other DBs
NCBI-ProteinID:
BAJ55251
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All DBs
Position
656082..657764
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AA seq
560 aa
AA seq
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MRFFILFFIGMLGVGFSQTELNLKDLEKKPAGIVRDYYLWRYISDKKTTLENAKKAYELT
QNKNNALQKAMQEKGSDNPEKSPDVKLPEDIYCKQTALESMLEETDTFQASCIAIALRSK
IRDFDKIPLQTLKPLQIKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYE
KKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALTKTNATHSNAQTFF
ILGINEILRKKPSKALKYFERSEAVIKDDDFSKDRAVFWQYLVSKKKKTLERLSQSPSLN
LYSLYASRKLQTTPSYRIISHIQNLSQEDPPFNTYDPFSWQIFKEKTLSLKDESAFNAML
KSLYYEKSTPELTYLLSQRNKDKIYYYLSPYEGIIEWQNIDEKAMAYAIARQESFLLPAV
ISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLKKEFNHPLF
VAYAYNAGPGFLRRWLESSKRFKEKNHFEPWLSMELMPYSETRLYGFRVMLNYLIYQEIF
GNFIPVDAFLEQTLNSKDKP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttttattttattttttatcggcatgcttggcgttggtttttctcaaaccgag
ttgaatttaaaagatttagaaaaaaagcccgccgggatcgttagggattattatttatgg
cgttatattagcgataaaaaaaccactttagaaaacgctaaaaaagcctatgaattgact
caaaataaaaacaacgccttacaaaaggccatgcaagaaaaaggctcagacaatccagaa
aaaagccctgatgttaaattgcctgaagatatttattgcaagcaaacggctttagaaagc
atgctagaagaaacagacactttccaagcaagctgtatcgctatcgctttaagatcaaaa
atcagagattttgataaaatcccccttcaaacccttaagcccttacaaattaaaatcaaa
gaggcttaccccattctttatgaagaattagaaattttacaaagtaagaatgtgagcgct
tctttatttaaggctaacgcgcaagtgtttagcgcgcttttcaaccatttgagttatgaa
aaaaagctccaaatttttgaaaaacatatccctattaaagagttaaaccgccttttagat
gaagattacccggcgtttaaccgcttgatctatcaggttattttagatcctaaattggat
cattttaaggacgctctcactaaaactaacgctacccacagcaacgcgcaaacctttttt
atcctagggattaatgaaatcttgcgcaaaaaaccctctaaagcgctcaagtattttgaa
cgctcagaagcggttatcaaggacgatgatttttcaaaagacagagcggttttttggcag
tatttagtctctaaaaagaaaaaaactttggaacgcctttcacaaagcccttccttaaac
ctctatagtctttatgcgagccgcaagctccaaaccacgcccagttatcgcatcatttct
cacatccaaaatttaagccaagaagaccctccttttaacacttatgaccctttttcgtgg
caaatttttaaggaaaaaaccttgagtttgaaagatgagagcgcgtttaatgcgatgcta
aaaagcttgtattatgaaaaaagcacccctgaattgacctatcttttaagccaacgcaat
aaggacaagatttattattatttatccccttatgaaggcattattgaatggcaaaatatt
gatgaaaaggctatggcgtatgcgatcgctaggcaagaaagtttcttgctcccggcagtc
atttcgcgctcttttgctctagggcttatgcaaatcatgccctttaatgtagggcctttc
gctaaaagccttggcatggataatgttgatctaaacgacatgtttaaccccaatatcgct
ctcaaatttggtaattattacttgaaccatctaaaaaaagaattcaaccacccccttttt
gtcgcctacgcttataacgctgggcctgggtttttaaggaggtggttagaaagctccaaa
cgatttaaagaaaaaaatcattttgagccatggcttagcatggagcttatgccttatagc
gaaacccgtttgtatggctttagggtcatgctcaattacttgatttatcaagaaattttt
gggaatttcatccctgttgatgcatttttagaacaaactcttaactcaaaggacaaacca
tga
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