Helicobacter pylori F16: HPF16_1479
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Entry
HPF16_1479 CDS
T01910
Symbol
pbp2
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hef
Helicobacter pylori F16
Pathway
hef00550
Peptidoglycan biosynthesis
hef01100
Metabolic pathways
hef01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPF16_1479 (pbp2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPF16_1479 (pbp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
HPF16_1479 (pbp2)
Enzymes [BR:
hef01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPF16_1479 (pbp2)
Peptidoglycan biosynthesis and degradation proteins [BR:
hef01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPF16_1479 (pbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BAJ56076
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All DBs
Position
complement(1556869..1558644)
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AA seq
591 aa
AA seq
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MKNLRYKLLLFVFIGFWGLLVLNLFILSVKNQEYYEKLAERNMTKKEFLVPTRGNITDRN
HEFLATNELVFGVFLPSGLKQKELLEKIGIIQKFFPNFSKETLLNNYQKENSFYNHNLIK
VVGFIPYAAMQPLYTKLIQTQGIFALPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGVEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSTNNHLQLSLDKRLQ
KEADKLFENKRGAILVMDAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLNITENTTIPTPSFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNKQPLKDPLNSFQKKK
LQALRVGMYEVCNHKNGTAYHSTRGSKVTLACKTGTAQVVEIAQNIINRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYLNQL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgctataagcttttgctctttgtttttatagggttttgggggttattg
gttttaaatttatttattttaagcgttaaaaatcaagaatactatgaaaaactggccgaa
cgaaacatgactaaaaaggaatttctagtccctacaaggggcaatattacagacagaaat
catgagtttttagccactaatgaattggtgtttggcgtgtttttgcccagcggattgaag
caaaaagaacttttagaaaaaattggaatcatccaaaagtttttccctaacttttccaaa
gaaacgcttttaaacaattaccaaaaggaaaattcgttttataaccataacctcattaaa
gtggttggcttcattccttatgctgccatgcaacctctttataccaaactcatccaaact
caaggcatttttgcgctccccttagacaagcgctactaccctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatctaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcgttgaaaaagaatacaacaagcttttacaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcgctcaatcaggaattagccacctta
gaagtagtgccgccaagcaccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggctattttagtgatggatgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccctactaaac
cgcttcgctaacgccttgtatccgccgggatctgtggttaaaatgggcgtgggcttgagc
ttcttagaaaaccttaacatcacagaaaacaccaccatacccaccccctctttcattgaa
gtgggcaagcgcaaattcagagattggaaaaaaacagggcatggcaattctaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gactggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttggctacg
cccttgcaggttctcgcctacacgggactcattgctacgggcaaactggcaacgcctcat
ttcgctatcaacaacaaacaaccgctcaaagatcccctaaacagctttcaaaaaaagaag
ctccaagccttgagagtgggcatgtatgaagtgtgcaaccataaaaacggcaccgcttat
cattccacaaggggttctaaggttactttagcgtgtaaaaccggcaccgcgcaagtcgtg
gaaatcgctcaaaacattatcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattaccgcctttttgccttatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggggggtcaaaactggggggcttgttagtgaaaatgagcaat
aaactctatgagcttggctatcttaaccaattgtaa
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