Helicobacter pylori Rif2: C730_03700
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Entry
C730_03700 CDS
T02318
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hei
Helicobacter pylori Rif2
Pathway
hei03030
DNA replication
hei03430
Mismatch repair
hei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C730_03700
03430 Mismatch repair
C730_03700
03440 Homologous recombination
C730_03700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hei03032
]
C730_03700
03400 DNA repair and recombination proteins [BR:
hei03400
]
C730_03700
Enzymes [BR:
hei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C730_03700
DNA replication proteins [BR:
hei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C730_03700
DNA repair and recombination proteins [BR:
hei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C730_03700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
DNA_pol3_gamma3
AAA_30
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFV45118
LinkDB
All DBs
Position
complement(770481..772217)
Genome browser
AA seq
578 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLKERYAILENYETESVLEEMMLFLKAKLLSPDFYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKFKALDDAILELEQTPFNQNPSISY
NAPKQESKNIEKREKIEQIERIEGTEKREKLEKKENAETPQTPMLSAKDRIFHNLFKQVQ
TLVYERNYELGAVFEKNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIVDGVFG
KGESIKIALKNHSENKSTLEVVKELKFPYSKPKPTTETTAETKEKETKEKEIQENDTKEI
QEVQPKQAPTALQEFMANHSELIEEIKSEFEIKSVELL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggctcagggaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaggctgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccaccacatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacagacgccttgaaactg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaagggagcctaagggatacgatcactcttttagaa
caagccatcaattattgcgataacgctatcacagaaagcaaggtggctgaaatgttagga
gcgattgacagaagcgttttagaagattttttccaaagcctaatcaaccaagatgaagcg
cgattaaaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattgagccctgatttttattctatccttttgata
gagcgcttttttaaaatcattatgagcagtttgagccttttaaaagaaggggcaaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaattcaaagcccta
gacgatgcgattttggaattagagcaaacccctttcaatcaaaaccctagcataagctat
aacgcccctaaacaagaatctaaaaatatagaaaaaagagaaaaaatagaacaaatagaa
agaatagagggaacagaaaaaagagaaaaactagaaaaaaaagagaacgcagaaaccccg
caaactcccatgctttcagctaaagatcgcatttttcacaaccttttcaaacaagttcaa
acattggtttatgagcgcaattatgagttaggggcggtgtttgaaaaaaatatccgtttc
attgattttgacagccagactaaaaccttgacttgggagtctttagccactgataaggat
aaggagcttttaagagaacgatttaaaatcgtgaaaagtatcgttgatggggtttttggc
aagggcgaaagtatcaaaatcgctttaaaaaatcattcagaaaataaaagcactttagaa
gtggttaaagagcttaaattcccttattcaaagcccaaaccaaccactgaaacgacggct
gaaacgaaagaaaaagaaactaaagaaaaagagattcaagaaaacgacactaaagagatt
caagaagtccaaccaaaacaagcccctacagcgttgcaagaattcatggctaaccactct
gagctgattgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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