Halomonas elongata: HELO_3610
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Entry
HELO_3610 CDS
T01311
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hel03021
]
HELO_3610 (rpoS)
Transcription machinery [BR:
hel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HELO_3610 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CBV43494
UniProt:
E1V7Q6
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All DBs
Position
complement(3068833..3069825)
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AA seq
330 aa
AA seq
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MSMLERDLQDVNLESAAEADDDAVETVEIEAGAADDSDEAFEKALSREDRHHHHSLDATQ
IYLNEIGFSPLLTPEEEVHYGRLARQGDPQGRSRMIESNLRLVVKIARRYLNRGLTLLDL
IEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYL
RAARELTQKLDHEATAEEIADHLDKPVASVKRMMGLNERVSSVDYPVGSESDKPLIETLT
DDNDLGPESTLVDGDVKQHVDDWLAELTDKQREVVVRRFGLRGHEASTLEQVGEEIGLTR
ERVRQIQVEALKKLRRMLDKQGLDLDAIFE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcttgaacgggaccttcaggatgtgaatctggaatcggccgccgaggcggat
gacgatgccgtcgagacggtagagatagaagccggcgcggccgatgacagtgacgaggct
ttcgagaaggcgctcagccgcgaggatcgccaccaccatcacagcctggatgccacgcag
atctacctcaacgagatcggcttctcgccgctgctgacgcccgaggaggaggtccactac
gggcgtctcgctcgccagggcgacccgcaggggcgttcgcggatgatcgagtccaatctg
cgtctggtggtcaagatcgcgcggcgctatctcaatcgtggcctgaccctgctcgacctg
atcgaggaaggcaatctggggttgattcgcgccgtcgagaaattcgatcccgagcgaggc
ttccgcttttccacttacgccacctggtggattcgccagaccatcgagcgggccctgatg
aaccagacccgcaccattcgtctgcccatccatgtggtcaaggaactcaacatctacctg
agggcagcgcgtgagctgacccagaagctcgaccacgaagccaccgccgaggaaatcgcc
gatcatctcgacaagccggtggcgagcgtcaagcggatgatgggactcaacgagcgggtg
tcctcggtggattacccggtgggcagcgaaagcgacaagcccctgatcgagacgcttacc
gacgacaacgacctgggccccgaatcgaccctggtggacggcgatgtcaagcagcatgtc
gacgactggctggccgagctgacggacaagcagcgcgaagtggtggtacgacgcttcggg
ttgcgtggccacgaggcttcgacgctggaacaggtcggcgaggaaatcggcctgacccgg
gagcgcgtgcgccagatccaggtcgaggcgctgaagaaactgcgccgcatgctcgacaag
caagggctcgatctggacgccatcttcgagtga
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