Helicobacter pylori Rif1: C695_05345
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Entry
C695_05345 CDS
T02317
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
her
Helicobacter pylori Rif1
Pathway
her02020
Two-component system
her02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
her00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C695_05345 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C695_05345 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
her03021
]
C695_05345 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
her02035
]
C695_05345 (fliA)
Transcription machinery [BR:
her03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C695_05345 (fliA)
Bacterial motility proteins [BR:
her02035
]
Flagellar system
Flagellar assembly proteins
Stator
C695_05345 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
MarR
MarR_2
DUF4202
KORA
TetR_C_44
HTH_34
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AFV43839
LinkDB
All DBs
Position
complement(1093682..1094449)
Genome browser
AA seq
255 aa
AA seq
DB search
MILMMENRMPKGIQKTETSEKNIEKVLNAYDKQQHHHQDDLAIQYLPAVRAMAFRLKERL
PSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSSRK
LIKSIDIEITKHLNEHGKEPSDAYLAQTLGENIEKIKEAKTASDIYALVPIDEQFNAIEQ
DEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIK
EVIKKVRKSLGVDHG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaaggaattcaaaaaactgaaacaagcgaa
aaaaatatagaaaaggttttgaacgcctatgataagcaacaacaccaccatcaagacgat
ctcgctattcagtatttaccagccgtgcgcgccatggcgtttcgtctaaaagagcgcttg
cccagctctattgattttaacgatctggtttctattggcactgaagaattgattaaatta
gccaggcgttatgagagcgcgttaaacgattctttttgggggtatgcgaagactcgtgtc
aatggggcgatgttagattatttgcgctctttagatgtgatttctcgctctagcaggaaa
ctcattaaaagcattgatattgaaatcaccaaacaccttaatgagcatgggaaagagcct
agcgatgcgtatttagcgcaaactttaggcgaaaatattgaaaaaattaaagaagccaaa
acggcttcagatatttatgcgttagtgccaatagatgaacaattcaatgcgattgagcaa
gatgaaatcactaaaaaaattgaagcagaagagttgttagagcatgtccaaaaagcgctg
aatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaagagttgaat
ttgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaaatcattaaa
gaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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integrated database retrieval system
