Helicobacter pylori SouthAfrica7: HPSA_01310
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Entry
HPSA_01310 CDS
T01921
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hes
Helicobacter pylori SouthAfrica7
Pathway
hes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPSA_01310 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hes03400
]
HPSA_01310 (xseA)
Enzymes [BR:
hes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPSA_01310 (xseA)
DNA repair and recombination proteins [BR:
hes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPSA_01310 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
ExbD
Motif
Other DBs
NCBI-ProteinID:
ADU84286
UniProt:
E8QUR8
LinkDB
All DBs
Position
263126..264388
Genome browser
AA seq
420 aa
AA seq
DB search
MDALSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCTLFRG
NASKLKFALKEGQEVAVFGAISVYPPRGDYQINCFEIEPKDWGSLALALEQLKEKLRLKG
YFDKKNKLPKPSFPKRVAVITSQNSAAWADMQKIAFKRWPMCELVCINTLMQGEGCVQSV
VESIAYADSFHNTKNAFDAIVVARGGGSMEDLYSFNDERIADALHLAKTFSMSAIGHESD
FLLSDSVADLRASTPSNAMEILLPSSEEWQQKLDEFNLKLQRSFKILLHQKRVHLEHLAA
SLKRLSFENKHHLNSLKLEKLKIALENKTLEFLRLKKTLLEKISTQLSTSPFLQTKTERL
NRLDNALKLAHAHLKLPKFGAFVSKNNQAVELEALKMGDRIELSNEKARASAAILSVDKA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattgagcgtgagtgaaatcaatgcacaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagcaatttgactatccataaggtgagcggg
catgcgtatttttcgctcaaagacagccagtcagtgattaaatgcactttatttaggggg
aatgctagtaagcttaaattcgccttaaaagaagggcaggaagtggctgtttttggggct
attagcgtgtatcctccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gattggggttcgttagctttggctttagaacaattgaaagaaaaattacgccttaaaggc
tattttgataaaaaaaataaattacccaaaccaagttttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggatatgcaaaagatcgctttcaaacgatggccg
atgtgcgaattggtttgtatcaataccttaatgcaaggggaggggtgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagttttcataacacaaaaaacgcttttgatgcgatt
gtggtggctagaggtggggggagcatggaggatttgtattctttcaatgacgaaagaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgactcggtggcggatttaagggcttctacaccatctaatgcgatggaa
atattactccctagcagtgaggaatggcaacaaaaacttgatgaatttaacttgaaattg
caacgctcttttaaaatcttgctccatcaaaaaagggtgcatttagagcatttagcggct
tctttaaagcggttgagttttgaaaacaagcaccatttaaattctttaaaactagagaaa
ttaaaaatcgctttagaaaataaaaccttagaatttttacgccttaaaaaaacgctttta
gaaaaaatttctacccaactctccacaagcccttttttacaaaccaaaacagaacgatta
aacaggctagacaacgcccttaaactcgctcatgcgcatttgaaattgcccaaattcggg
gcgtttgtgagcaaaaacaatcaagcggtagaattagaggcattaaaaatgggcgataga
attgaattgagtaatgaaaaagccagagcgagcgctgcaattttgagcgtggataaagcg
tag
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