KEGG   Helicobacter pylori F57: HPF57_0757Help
Entry
HPF57_0757        CDS       T01912                                 

Gene name
ddl
Definition
(GenBank) D-alanyl-alanine synthetase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hex  Helicobacter pylori F57
Pathway
hex00473  D-Alanine metabolism
hex00550  Peptidoglycan biosynthesis
hex01100  Metabolic pathways
hex01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hex00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    HPF57_0757 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPF57_0757 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    HPF57_0757 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hex01011]
    HPF57_0757 (ddl)
Enzymes [BR:hex01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     HPF57_0757 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:hex01011]
 Precursor biosynthesis
  Amino acid ligase
   HPF57_0757 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 GARS_A ATPgrasp_TupA RimK VitD-bind_III ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID: BAJ59831
UniProt: E6NRR5
LinkDB All DBs
Structure
PDB: 

Position
801956..802999
Genome map
AA seq 347 aa AA seqDB search
MEFCVLFGGASFEHEISIVSAIALKEALKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLPPLILTRNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKTLDYVLLNEKNRANALNLIGFNFPFIVKPSNAGSSLG
VSVVKEEKELIYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYIEEPNKQEF
LDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGALIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq 1044 nt NT seq  +upstreamnt  +downstreamnt
gtggagttttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaagaagcgctaaaggataggattaaatattttatttttttagatgaa
aaccatcatttttacttgattgaagaatctaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattacctcccctaatccttacgcgcaatggcttgcttaaaaactcgttt
ttaggcgctaagattatagaattacccttagtgattaatcttgtgcatgggggcgatggc
gaagatgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgccaaagactta
ggggtaaagactttagattatgttcttttgaatgaaaaaaaccgcgctaacgctctaaat
ttgattggctttaattttccttttattgtcaagcccagtaacgccggaagctctttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacggcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcagggagtgaaagaatacaatttagccggc
tgcaagatcaaaaaggatttttgtttttcttatattgaagagcctaacaaacaagaattt
ttagatttcaaacaaaaatatttggatttttcacgcaacaaagcccctaaagcgaatctt
tctaacgccctagaagagcaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgctcatccgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggccaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcacaatcattacccaaaacccctaaaatcccaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa

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