Helicobacter felis: HFELIS_03330
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Entry
HFELIS_03330 CDS
T01375
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
hfe
Helicobacter felis
Pathway
hfe03030
DNA replication
hfe03430
Mismatch repair
hfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFELIS_03330 (dnaN)
03430 Mismatch repair
HFELIS_03330 (dnaN)
03440 Homologous recombination
HFELIS_03330 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfe03032
]
HFELIS_03330 (dnaN)
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_03330 (dnaN)
Enzymes [BR:
hfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFELIS_03330 (dnaN)
DNA replication proteins [BR:
hfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFELIS_03330 (dnaN)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFELIS_03330 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
SAP18
Motif
Other DBs
NCBI-ProteinID:
CBY82417
UniProt:
E7A8Y1
LinkDB
All DBs
Position
complement(300367..301437)
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AA seq
356 aa
AA seq
DB search
MKFIIAKTELEAALKDLIAFTNKKDMVNITSHVCIEAKTDALIFQANDLEMGLCLTLNIP
AQETGSAVLNAKYLLDIISKLEKGDLLLESQDNFMHVHFKRSKFKLPLLDKEYFPSFPTY
DHLPVVYFDDSTLSDYFKKLAQVITTNASKYEFSGVLLALQENLELVATDTKRLSVVQME
IGGTTSADRQELILPKRAMLEVAKLFRGDFEMRYDKNMIFFKNASMVLFAKLISGKYPHY
QNIIPSTFAHQLECNTQDFKDAINITQALGATTKIIFRPDKIEFETLQTENPSFASTFVE
ASTPLDGFVIHAQARHLLDALSALSTPTFDFCLSVENQPFVIQKNGFITVVMPVAI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcatcattgctaaaacggaattagaggccgcactcaaggatctcatcgccttt
accaataaaaaagacatggttaatatcacttctcatgtttgcattgaagctaaaacagat
gctttaatttttcaggctaatgatttagaaatgggactgtgcttgactttaaatattcct
gctcaagaaaccggtagcgcggttttaaacgctaaatatttgctagacatcatctctaaa
ttagaaaagggagatttgctcttagagagtcaagacaactttatgcatgtccactttaaa
cgctctaaatttaaattgcctcttttggacaaagaatatttcccctcattccccacttac
gatcatcttcctgtcgtatattttgacgattccactctgagcgactattttaaaaagctt
gctcaagtcattacaacaaacgcgtccaaatatgaattttcaggagtgcttttagccctc
caagagaatttagaacttgtcgccacagatacaaaacggctctctgtcgtgcagatggaa
attggaggaacaacaagcgcggacagacaagagttgattcttccaaaacgagcgatgctt
gaggtcgctaaactctttagaggggactttgaaatgcgctatgataaaaacatgatcttc
tttaaaaacgcgtctatggtgttgtttgcaaaactcatcagtggtaaatacccccattac
caaaacattatcccctctacatttgcccaccaactagaatgtaacacccaagattttaaa
gatgctatcaatatcacacaagcactaggagcgaccacgaaaattattttccgccccgat
aaaattgaatttgaaactctgcagacagaaaaccctagttttgcttctacttttgtggag
gcgagcactcccctagatggttttgtgatccacgcccaagcgcgccatttattagacgct
ctgagcgctctctccacccccacttttgatttttgccttagcgttgaaaaccaacccttt
gtcattcaaaaaaatggtttcatcactgtggtgatgcccgtagcgatataa
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