Herbaspirillum frisingense: G5S34_04225
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Entry
G5S34_04225 CDS
T06761
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfr03400
]
G5S34_04225
Enzymes [BR:
hfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S34_04225
DNA repair and recombination proteins [BR:
hfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G5S34_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
DEAD
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNB09801
UniProt:
A0A7G6B3G7
LinkDB
All DBs
Position
924561..928049
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AA seq
1162 aa
AA seq
DB search
MPQGSLAVSTGEIGRSAPAAYEIDGSAVEAAQFTRAACDPRHSVVVEACAGSGKTWLLVA
RMLRLLLAGAQAPELLAITFTRKAAQEMRERLMELLHELALADEAGAAALLRERGVAEPD
LPRLLPVARGLYERILSSEQSLSIDTFHSWFARLLQIAPLASGVPHGYTLTEKNGELLDE
AYRRFMQKLRNPEGERIKAALLELYELAGDFNARQLLDAFIDKRAEWWAATQHDGDDSEE
SDAPTPLLWLQALCGEDAQRDARLSLWDDAVLVERASRIAILLGQGGAANKTRAVAIESA
LTAGPALAHFDALYSQFFDDKDKPRKNGKVKSLLAALVQHFQVGEDAALEAFDSEFNAVG
AELRKLQGRSKEKQVLQLNRALFIAGRAYLDSYQEVKSEQRVLDFADLEWQAYRLLNDEA
SAAYLQTRLDARYKHILLDEFQDTNPLQWSIVRSWLRAYGGDAAQPSVFVVGDPKQSIYR
FRRAEPRVFVAARDLLRAQGAAVLRANQTRRNASAVVEVLNRSFVRGGNPLFAQQTTLGL
EGGEVWRLPLVRQEEGAENVNDEDADADASDPAPVIAWRNPLTTARGEEDDARRLLEGQA
LAQALLKASREVPVVDGKLTRPMRWSDIMLLVRKRSHLAAYESALRAAGIPFISDKRGGL
LESLEIADLIALLTFLITPNDTRALAHVLKSPIIGAADDDLVQIARRAALADGGHWWQHM
LAMQQEGVASAALVRAAGMLQRWLQAAPHLPVHDLLDMILHQGDLVARYAQYASPLTRSQ
TLGNIAAFVELSLNMDAGRYPSLPKFIDALRVLQRSAGGDAPDEASVDASADAVRILTVH
SAKGLEAPVVAILDANHSESVEDNLGIICEWPQDQDAPTHFSAFGRRSERGAARQRLFDE
EDALRQQEDWNLLYVAVTRAKQLLLVSGVAGTRGAGEGGVVAGSWYERLFASDAPVREIS
EEAVQGAQAAAPEERFELSLFEPRPVPLSLFGAGTGTGEAETPTVVAEDGTLVASEAIDE
GVALHALLERLTHDQAWPLALPAPPVLVRWLGVSTEMAQVVHAQAHQMLAQPQLERFFNP
ALHRWARNEMEIVSTSGVMRLDRVVMFEDEVWVLDYKRRLLDSERADYAAQLARYRSALV
SVFSDMRIRSALITADGTLVEH
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ctgccgcaagggagcctggctgtgagcaccggcgagatcggcaggtccgcaccggcggct
tatgagatcgacggcagcgccgtcgaggccgcccagttcacccgcgccgcctgcgacccg
cgccactcggtggtggtggaagcctgcgccggcagcggcaagacctggctgctggtggcg
cgcatgctgcggctgttgctcgcgggcgcccaggcgcctgagctgctggccatcaccttc
acccgcaaggccgcgcaggaaatgcgcgaacgcctgatggagctcttgcatgaactggcg
ctggccgatgaggccggtgccgccgcactgctgcgcgagcgcggcgtagccgagcccgat
ctgccgcggttgctgccggtggcgcgcggcctgtatgagcgcatcctgtcgtccgaacag
agcctgtccatcgataccttccatagctggtttgcacgcctgctgcagatcgcgccgctg
gcctcgggcgtgccgcatggctataccctgaccgagaagaatggcgagctgctggacgag
gcctatcgccgcttcatgcagaagctgcgcaaccccgagggcgagcgcatcaaggctgcc
ttgctggaactgtatgaactggctggcgacttcaatgcccgccagttgctggacgccttc
atcgacaagcgtgccgaatggtgggccgcgacccagcacgatggcgacgacagtgaagag
agcgatgcgccgaccccgctgctgtggctgcaagccctgtgcggcgaggatgcgcagcgc
gatgcacgcctgtcgttgtgggatgacgctgtcctggtggagcgcgccagtcgtatcgcc
atcctgctggggcagggcggtgccgccaacaagacccgtgccgtggccatcgaatcggcg
ttgactgccggcccggcgctggcgcacttcgacgcgctgtacagccagttcttcgacgac
aaggacaagccgcgcaagaacggcaaggtgaaatccctgctggcggcattggtgcagcat
ttccaggtgggcgaggatgccgcgctggaagccttcgacagcgaattcaatgccgtcggc
gccgagttgcgcaagctgcagggacgcagcaaggaaaagcaggtgctgcagctcaaccgc
gcccttttcatcgccggccgcgcctatctcgacagctatcaggaagtgaaatcggaacag
cgcgtgctggacttcgccgacctcgaatggcaggcctatcgcctgctcaatgacgaggcc
agtgccgcctacctgcagacccggctggatgcccgctacaagcacatcctgctggacgaa
ttccaggacaccaacccgctgcaatggagcatcgtgcgttcctggctgcgtgcctatggc
ggcgacgcggcgcaaccgagcgtgttcgtggtgggggaccccaagcaatcgatctatcgc
ttccggcgcgccgagccccgggtgttcgtggcggcgcgtgacctgttgcgcgcgcagggc
gcggccgtgctgcgcgccaaccagacgcggcgcaatgccagcgccgtggtcgaggtgctc
aatcgctcattcgtgcgcggcggcaatccgctgttcgcccagcagaccacgctgggcctg
gagggaggcgaggtgtggcgcctgccgctggtgcggcaggaggaaggtgcagaaaacgtc
aacgacgaggacgccgacgccgacgccagcgacccggcgcccgtgatcgcctggcgcaat
ccactgaccacggcacgtggcgaggaagacgatgcccgtcgcctgctggaggggcaggcg
ctggcgcaggcgctgctcaaggccagccgcgaggtgccggtggtggacggcaagttgacc
cggcccatgcgctggagcgacatcatgctgctggtgcgcaagcgcagccacctggcggcc
tatgaaagtgccttgcgcgcagccggcatccccttcatctcggacaagcgcggcggtctg
ctggagtccctggagatcgccgacctgatcgcgctgctgaccttcctcatcacccccaac
gacacgcgggcgctggcgcacgtcctcaagagtcccatcatcggcgcggccgacgacgat
ctggtacagattgcccgccgtgccgcactggccgatggcggccactggtggcagcacatg
ctggccatgcagcaggaaggtgtggcctcggccgcgctggtgcgcgcagcgggcatgttg
caacgctggttgcaggcggcaccgcacctgccggtgcatgatctgctggacatgatcctg
caccagggcgacctggtcgcgcgctatgcccagtacgcctcgccgctgacgcgcagccag
accctgggcaatatcgccgccttcgtggagctgtcgttgaacatggatgccggacgttat
cccagcctgcccaagttcatcgacgcgctgcgcgtgttgcagcgcagtgccggtggtgat
gcgcccgacgaggccagcgtggatgccagcgccgatgccgtgcgcatcctcaccgtacac
agcgccaaggggctggaggcgcccgtggtggcgatcctggatgccaatcacagcgaatcg
gtggaagacaacctgggcatcatctgcgaatggccgcaggatcaggatgcgccgacgcat
ttctccgccttcggccgacgcagtgaacgtggcgcggcccgccagcgcctgttcgacgaa
gaggatgccctgcgtcagcaggaagactggaacctgctctacgtcgccgtcacccgcgcc
aagcaattgctgctggtgtccggcgtggccggcacccgtggcgccggggagggcggtgtg
gtggccggtagctggtacgagcgcctcttcgccagcgatgccccggtacgcgagatcagc
gaggaggcggtgcagggcgcgcaggcggcagcgccggaagagcgcttcgagctgtcgctg
ttcgagccgcggccggtcccgttgtcgctgttcggtgcgggcaccggcactggcgaggcc
gaaacgccgaccgtcgtggccgaagacggcaccctggtcgccagcgaagccatcgatgaa
ggcgtggccctgcacgcgctgctggagcgcctgacgcatgaccaggcctggcccctggcg
ctgcccgcgcccccggtgctggtgcgctggctgggtgtgtcgacggagatggcgcaggtg
gtgcatgcgcaggcgcaccagatgctggcgcagccgcaactggaacgcttcttcaatccg
gccctgcaccgctgggcgcgcaacgagatggagatcgtttccaccagcggtgtgatgcgc
ctggaccgggtcgtgatgttcgaggatgaagtctgggtgctcgactacaagcggcgcctg
ctcgatagcgaacgcgccgattacgccgcgcagctggcgcgctatcgcagcgcgctcgtg
tcggtcttttctgacatgcgaatcaggtctgcgctgattaccgcagatggcacgctggtg
gaacattga
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integrated database retrieval system
