KEGG   Heterocephalus glaber (naked mole rat): 101701011Help
Entry
101701011         CDS       T02812                                 

Gene name
Lig3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
hgl  Heterocephalus glaber (naked mole rat)
Pathway
hgl03410  Base excision repair
Module
hgl_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101701011 (Lig3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hgl03400]
    101701011 (Lig3)
Enzymes [BR:hgl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101701011 (Lig3)
DNA repair and recombination proteins [BR:hgl03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101701011 (Lig3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 101701011
NCBI-ProteinID: NP_001297204
UniProt: A0A0A7HV67
LinkDB All DBs
Position
Un
AA seq 1016 aa AA seqDB search
MTLTFKILFSRNLQALGRKELCSFREQSHWSGIRQLSSWSRTDLLHGHFLLQRRKPVLPL
QGGHLRPQATCFIFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGICRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDSEKEQITQ
HIADLSSKAASTPKKKAVVQAKLTAAGQVTSPVKGSSFVTSTNPRKFSGFSAAKPNNSEQ
APSSPAPKTSLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNSKTQIIQDFLRKGSAGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNADDMARDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERILQNEQEVKKEPGRKRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCV
YFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINQVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
GSQKWCTVTKCAGGHDDATLTRLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKK
AAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADF
TIVAGDEGGSTTGGSSGENEGTSGTAVSHKAPRASPKPSASARKAEGKLSNPNSKDSNKL
NAKPSPVKLGEKLALKSSPVKVGEKRKAADDSPCHAKVKVLLDIFTGVRLYLPPSTPDFG
HLRRYFVAFDGDLVQEFDVASATHVLGNRDKNPEAQLVSPEWIWACIRKQRLVAPC
NT seq 3051 nt NT seq  +upstreamnt  +downstreamnt
atgactttgactttcaagatcctcttctcacgaaacctccaagcacttggacgaaaagag
ctgtgttcattccgagaacagtctcattggtctggcataagacagctcagtagttggtca
agaacagatctgcttcatgggcacttcctcctccagagaagaaagcctgttctgcctttg
cagggaggccatctaagaccacaagccacctgcttcattttcttgccagggtcgcatgtg
ggactctgcagtggcccatgtgagatggctgagcaacgattctgtgtggactatgctaag
cgcggcacagctggctgcaaaaaatgcaaagaaaagattgtgaagggcatatgccgaatt
ggcaaagtggtacccaacccattctcagaatctgggggtgatatgaaagaatggtaccat
attaaatgtatgtttgagaaactggagcgagctcgggccaccacaaaaaaaattgaagac
ctcactgagctggaaggctgggaagaactggaagatagcgagaaggaacagataactcaa
catattgcagatctatcttctaaggcagcaagtacaccaaagaaaaaagctgttgttcag
gctaagttgacagccgctggccaggtgacttccccagtgaaaggctcctcatttgtcacc
agtaccaatccccggaaattttctggtttttcagcagccaagcccaacaattctgagcaa
gctccctcaagccctgcgcctaagacaagtctctcttcaagcaaatgtgaccccaagcac
aaggattgtctgctacgggagtttcggaagttgtgtgccatggtggctgataatcctagc
tataactcaaagacccagatcatccaggacttcttgcggaaaggctcagcaggagatggt
ttccacggcgatgtatatctaacagtgaagttgctgctaccaggtgtcattaagagtgtt
tacaacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaatgca
gatgatatggcacgagacctagaacagggtgacgtgtcagagacgatcagagtcttcttt
gagcagagcaagtctttccctccagctgccaagagcctccttactatccaggaagtagat
gaatttcttctgcaactctccaagctcaccaaggaggatgagcagcagcaggccctgcag
gacattgcctctaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaaacat
gatctgaagatgaactcaggtgcaaaacatgttttagatgcccttgaccccaatgcctat
gaagctttcaaagcctcacgcaatctgcaggatgtggtggagcggatccttcaaaatgag
caagaggtaaagaaggagccaggccggaaacgggctctgagcgtccaggcctcactgatg
acccccgtgcagcctatgctggcagaggcctgcaagtccatcgagtatgcaatgaagaag
tgtcccaatggcatgttctctgagatcaaatatgacggtgagcgagtccaggtgcataag
aatggggaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtg
gcccactttaaggactacatcccccaggcttttcctgggggtcatagcatgatcttggac
tctgaggtactcctgattgacaacaaaacaggcaaaccactgccctttgggactctgggt
gtgcacaagaaagctgctttccaagatgctaatgtctgcctgtttgtttttgattgtgtc
tacttcaatgatgtcagcttgatggacaggcccctttgtgagcggcggaagtttcttcat
gacaacatggttgaaattcccaaccggatcatgttctcagaaatgaagcaagttacaaaa
gcttcggacttggctgatatgataaaccaagtgatccgggagggcttggaagggctggtg
ctgaaggatgtgaagggtacgtatgagcctgggaagcggcactggctgaaagtgaagaaa
gactatttgaatgagggggccatggccgacacagctgacctggtggttcttggggccttc
tatggacaaggcagcaaaggtggcatgatgtcaatcttccttatgggctgctatgatcca
ggcagccagaagtggtgcacagtcaccaagtgtgcaggaggccatgatgatgcaacactc
acccgcctgcagaaggaactggacatggtgaagatcagcaaggaccccagcaaaataccc
agctggctgaagatcaacaagatatactatcctgacttcatcgtcccagacccaaagaaa
gctgctgtgtgggagatcacaggagcagaattctccaaatctgaggcacacacagctgat
gggatctccattcgattccctcgctgcacccgaatccgggatgacaaggactggaaatct
gccaccaatctcccccaactcaaggaactgtaccagctgtccaaggagaaggcagacttc
actatagtggctggagatgaggggggctccactacaggaggcagcagtggcgagaatgag
ggcacctcagggactgctgtttctcacaaggcacccagagcctcccccaaaccttctgcc
agtgccaggaaggctgaagggaagctgagtaaccctaacagcaaagacagcaacaagctg
aatgcaaagccttcccctgtgaaactgggagagaaactggccttgaagtcttccccagtg
aaagtaggggagaagaggaaagctgctgatgacagcccatgccatgcaaaggtgaaggtg
ctgctggacatctttactggggtgcggctctacttgccaccctccacaccagacttcggt
catctcagacgctactttgtggcattcgacggggacctggtgcaggaatttgacgtggcc
tcagccacccacgtgctcggtaacagggacaagaaccctgaggcccagctggtctcccca
gagtggatttgggcatgtatccgtaaacagaggctagtagctccctgctag

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