Heterocephalus glaber (naked mole-rat): 101724783
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Entry
101724783 CDS
T02812
Symbol
Mbd4
Name
(RefSeq) methyl-CpG binding domain 4, DNA glycosylase
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101724783 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hgl03036
]
101724783 (Mbd4)
03400 DNA repair and recombination proteins [BR:
hgl03400
]
101724783 (Mbd4)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
101724783 (Mbd4)
DNA repair and recombination proteins [BR:
hgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101724783 (Mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
101724783
NCBI-ProteinID:
XP_004870508
LinkDB
All DBs
Position
Un
AA seq
567 aa
AA seq
DB search
MTNPSPGDGGEVSERRDPEPLRDLREEDGATGLEKVGKDEKQMVINRSRECNALLQKPIA
STQFVGAAVTECHKPVLCGWERIVKQRLSGKTAGRFYVYFISPQGLKFRSKSSLANYLHK
NGDTALEPEDFDFSVLSKRNIKSRCKGSSVAALTAQQQNESNVSNRNLRTRRWQKMDVSP
LPSNTSELQDDRGLSNLDSIRMLLKEEENVNDVSSGKIRKFKGNVTILEGIQIKKTRKQC
RNSLSDSLQSNTKKESVFDKAEAESMSVTQGNQLNRAFCISDAIAANGTFSVTEKEKSLI
KEKSPSSGSDFHFEQITSGTTNKSCPTTEAEHEKYEESFLESEEMRTKVEDRERKEHLHT
DILQYGSEVDNSCSQNRKDFTSEKICPEDSIPRIHTEKRKTSQYFSSKYNREALSPPRRK
AFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEAARA
ANWRDVSELLKPLGLYELRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEW
KQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatccgagcccgggggacggcggagaagtctccgagcgccgagacccagagcct
ctgcgtgacctccgtgaggaagatggtgctacaggtttggaaaaagtgggaaaagatgaa
aaacaaatggtgataaacagaagcagggagtgtaatgccctgctacagaaacctattgct
tctactcagtttgttggtgctgcagtgacagaatgtcataaacctgtcctctgtggatgg
gaaagaattgtgaagcaaaggttatctgggaaaacagcaggaagattttatgtgtacttt
atcagcccacagggactgaagttcagatccaagagttcacttgctaattatcttcacaaa
aatggagacacagctctagagccagaagattttgacttttctgtactttctaaaaggaac
atcaagtcaagatgtaagggctctagtgtggcagctctgacagcccaacagcaaaatgaa
agtaacgtttcaaaccggaaccttcggactcgaaggtggcagaaaatggatgtttctcct
ctgccaagtaatacttcagagttgcaagatgacagaggactatccaaccttgattccatc
agaatgcttttgaaagaagaagagaatgttaatgatgttagctctgggaagattaggaag
ttcaaaggaaacgtgactattttggaaggaattcaaattaagaaaaccagaaaacagtgc
aggaacagtctttcagattctctccaaagtaatacaaaaaaagaatctgtgtttgataaa
gcagaggctgaaagtatgtctgttacacaaggaaatcagcttaatagagctttctgcatt
tctgatgccatagcagccaatggtaccttcagtgtgactgagaaggaaaagagcctcata
aaagaaaaatcaccaagctcaggatcagattttcattttgaacaaataacatctggtacc
acaaacaaatcatgtccaaccacagaagcagaacatgagaagtatgaggaaagcttttta
gaatcagaggaaatgagaacaaaagtagaagatagagaaagaaaggaacatttgcatact
gacattttacagtatggctctgaagtggacaacagctgctcacaaaacaggaaagacttt
acttctgagaaaatatgtccagaagacagcatcccacgaatacacacagaaaagcggaag
acaagccagtacttctccagcaagtataacagagaagctcttagccctcctcgacgcaaa
gcctttaaaaagtggaccccacctcggtcgccttttaatctcgtccaggagacactgttc
catgacccgtggaagctcctcatcgcaacgatatttctcaatcggacctcaggtaagatg
gcaatccccgtgctctgggagttcctggagaagtacccctcggccgaggcagcgagagct
gcaaactggagggatgtgtcggagctgcttaaacctctcggcctctatgagctccgagcc
aaaaccattgtcaagttttcagatgagtacctgacgaagcagtggaaatatccaattgag
cttcatgggatcggcaaatacggcaatgactcttaccggattttttgcgtcaatgagtgg
aagcaggtgcacccagaagaccacaagctgaacaagtaccacgactggctttgggaaaac
catgaaaagctgagtctgtcctga
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