Halorhodospira halophila: Hhal_0924
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Entry
Hhal_0924 CDS
T00462
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
hha
Halorhodospira halophila
Pathway
hha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hhal_0924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hha03019
]
Hhal_0924
Enzymes [BR:
hha01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
Hhal_0924
Messenger RNA biogenesis [BR:
hha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Hhal_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
Shikimate_DH
P-loop_SecA
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABM61700
UniProt:
A1WVI8
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All DBs
Position
997740..998951
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AA seq
403 aa
AA seq
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MTFENIGLSQELLRAVAQQGYDQPTAIQAQAIPAVLGGGDVMASAQTGTGKTAAFTLPLL
QRLSDTAPQQGQRRIRALVLTPTRELAAQVSESVATYGRHLPLRSTEIYGGAPMGKQTAA
LRRGVDIVVATPGRLIDHLDRGNVDLRHVDMLILDEADRMLDMGFKPAIERILKSVPNQR
QTLLFSATFSGAVGGLARRFLNEPTVIEAGTANAAAEAVEQGAYFVDAGRKRELLTQLIN
DGDWRQVLVFTRTKRGADRLAEQLEREGIRSQSIHGDKSQGQRGRALAAFKRKSVRALVA
TDVAARGLDIAGLPHVVNYDLPNNPEDYIHRIGRTGRGGDSGEAWSLVGGEERGQFKAIQ
RLVKREIPAQIAQGFEPVRRGGSAPTRRNNPRRGQGGRPGRAA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgagaatatcggcctttcccaagaactgctccgcgccgttgcccagcagggc
tacgaccaacccaccgccatccaggcccaggccatcccggcggttctaggcggcggcgac
gtcatggccagcgcccagaccggcaccggcaagaccgcggcattcaccctgccgctgctc
cagcgcctgagcgacaccgccccgcagcagggccagcgacgcatccgcgccctggtgctg
acccccacccgcgagctggcggcccaggtcagcgagagcgtggccacctacgggcgtcac
ctgccgctgcgctctacggagatctacggcggtgcccccatgggcaaacagaccgccgcc
ctgcgccgcggcgtcgacattgtcgtagccacgccgggccggctgatcgaccatctggac
cggggcaacgtcgacctccgccatgtggacatgctgatcctcgatgaggccgaccgcatg
ctcgacatgggcttcaagccggccatcgagcggatcctcaagtcggtgccgaaccagcgg
cagacgctgctcttctcggccaccttctccggcgctgtcggcggcctggcgcgccgcttc
ctgaacgagccgacggtcatcgaggccggcaccgccaatgccgctgccgaggcggtggaa
cagggggcgtacttcgtcgacgccgggcgcaagcgcgagctgctcacccaactgatcaac
gacggcgactggcgccaggtgctggtcttcacccgcaccaagcggggcgccgaccgcctg
gccgaacagctcgagcgcgagggcatccgctcgcaatcgatccacggcgacaagagccag
ggccagcgcggccgggcgctggcggcgttcaagcgcaagtcggtccgcgccctggtggcc
accgacgtggcggcccgcggcctggacatcgccggtctgccccacgtggtcaactacgac
ctgccgaacaaccccgaggactacatccaccgcatcggccgcaccggccgcggcggggac
agcggcgaggcgtggtcgctggtcggcggtgaggagcggggccagttcaaggccatccag
cggctggtcaagcgggagatcccggcgcagatcgctcagggcttcgagccggtccggcgg
gggggtagcgcccccacgcggcgcaataacccgcgccgcggtcagggcgggcggcccggt
cgcgcggcctaa
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