Helicobacter hepaticus: HH_1127
Help
Entry
HH_1127 CDS
T00133
Symbol
gyrB
Name
(GenBank) DNA gyrase (topoisomerase II)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hhe
Helicobacter hepaticus
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhe03032
]
HH_1127 (gyrB)
03400 DNA repair and recombination proteins [BR:
hhe03400
]
HH_1127 (gyrB)
Enzymes [BR:
hhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HH_1127 (gyrB)
DNA replication proteins [BR:
hhe03032
]
Prokaryotic type
DNA Topoisomerases
HH_1127 (gyrB)
DNA repair and recombination proteins [BR:
hhe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HH_1127 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AAP77724
UniProt:
Q7VH40
LinkDB
All DBs
Position
1095901..1098219
Genome browser
AA seq
772 aa
AA seq
DB search
MEKKEYQASNIKVLKGLEAVRKRPGMYIGDTNSGGLHHMIYEVVDNSIDEAMAGYCDKIN
ITLTMEGSAIIEDNGRGIPVDIHPTENLPAATLVLTTLHAGGKFDQDTYKVSGGLHGVGV
SVVNALSKRLIMTIKKNGHIYRQEFAKGIPQSDLEVIGNTKKHGTTIEFFPDGEVMEVLE
FDKDILVRRFKEMAYLNHNITIQFKDERTQFEEIYHFEGGLKQFIQDVNKKPLISSIISF
EATEQESEIEIALAYNEGYDEKLLSFVNNIRTPDGGTHEAGFRAGLSRAIMNYIEANANA
REKDAKVSGEDVREGLVAIISTKIIDPQFEGQTKGKLGSSFVKPIVQKLTYEKLSKFFEE
NPNEAKAIMQKAIMAARGREAAKKARDLTRKKESFSVGTLPGKLADCQSKDPSVSEIYLV
EGDSAGGSAKQGRDRTFQAILPLRGKILNVEKSRLDKILKSDEIKNMITAFGCGIGEEFN
IEKLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLKPLVENGHIYIAQPPLYRYKKGKKEI
YLKDERALSEYLIENGIENFKFEGVGNRELLEILKFISHYRSILKELEKRYPMIEVVRYL
VENEQFDTLELKALSQNIESYLISKECNILNKTTAQEQITLYVQTKVGLVELSINDTLFM
DNFFQEARFIYKKIADRDLGFLNDEDMIVFLERIEESAKKDAYIQRYKGLGEMNPDQLWE
TTMIPQNRTLLRVKIDNDINTDEIFTLFMGDEVEPRRAYIQEHAKDVKHLDV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaagaatatcaagcaagtaatattaaagttttaaaaggcttagaagctgtc
cgaaaacgccctggtatgtatattggtgatacaaactctggtggattgcatcatatgatt
tatgaagtagtagataattcaatagatgaagctatggcagggtattgtgataaaatcaat
attactctcactatggaaggcagtgctattattgaagataatggacgcggaatcccagta
gatattcatcctactgaaaatcttcctgcagccacactcgttcttacaacacttcacgca
ggtggaaagtttgaccaggatacttacaaagtttctggcggattacacggagtaggtgta
agtgtagtgaatgctctttctaaacgtcttattatgactatcaaaaaaaatggacatatt
tatcgtcaagagtttgctaaaggtatccctcaaagcgatttagaagttatcggtaatact
aaaaaacacggcaccaccattgagttcttccctgatggagaagtaatggaagtgcttgaa
tttgataaagatattcttgttcgtagattcaaagaaatggcatatcttaaccataatatt
accattcaatttaaagatgaacgcacacaatttgaagaaatctatcactttgaagggggg
ctaaaacaatttattcaagatgtaaataaaaagccacttatttcatcaattataagtttt
gaggctacagagcaagagagtgaaattgaaatcgctcttgcttataatgaaggctatgat
gaaaaacttttaagttttgtaaataatattcgcacacctgatggaggaacacacgaggca
ggatttagagcaggattgagccgtgcgattatgaattatattgaagcaaatgcaaatgca
cgtgaaaaagatgcaaaagtaagtggtgaagatgtgcgtgaagggcttgtggcgattatt
tctactaaaattattgatcctcaatttgaaggacaaactaaaggcaaacttggaagctct
tttgttaagcctattgtgcaaaagctcacttatgaaaaactttcaaaattctttgaagaa
aatcctaatgaagctaaggctattatgcaaaaagctattatggcggcgcgcgggagagag
gctgctaaaaaagctcgtgatttaacgcgtaagaaagaaagtttttctgttggcactttg
cccggtaagcttgcagattgccaaagtaaagatccgagtgtgtcagaaatttatcttgta
gaaggtgatagtgctggtggaagtgcaaaacaaggacgtgataggactttccaagcaatc
ttgccattgcgtggaaaaattcttaatgttgaaaaatctcgtcttgataagattttgaaa
tctgatgaaattaaaaatatgattactgcttttggttgtggtataggtgaagaatttaat
atagaaaaattgcgttatcacaaaattattattatgacagatgcagatgttgatggaagc
catatacaaacgcttttaatgacatttttctatcgttatttaaaacccttagtcgaaaat
ggacatatttatattgctcaaccgccactttatcgttataaaaagggcaaaaaagaaata
tatcttaaagatgaacgtgctttaagcgaatacttaattgaaaatggcattgaaaatttc
aagtttgagggtgttggtaaccgtgaattacttgagattcttaaatttatttcacattat
cgttcaatcctcaaggagctagaaaaacgttatccgatgattgaagttgtgcgttatttg
gttgaaaatgagcagtttgatacattagagcttaaagcattaagtcaaaatatagaatct
tatcttataagcaaagaatgcaatattttaaataaaacaactgcacaggaacaaattacg
ctttatgtgcaaacaaaagttggacttgtagagcttagcattaatgacacactttttatg
gataatttcttccaagaagcacgatttatttataagaaaattgccgatagagatttagga
tttttaaatgatgaagatatgattgttttcttagagagaattgaggaaagtgcaaaaaaa
gatgcttatatccaaagatacaaaggtttaggagagatgaatccagatcaattatgggaa
acaacaatgattccacaaaatcgcacacttttgcgtgttaaaattgataatgacataaac
actgatgaaattttcacactttttatgggtgatgaggtagagccacgaagagcttatata
caagagcacgctaaagatgtaaaacaccttgatgtgtag
DBGET
integrated database retrieval system
