Herbaspirillum huttiense: E2K99_22150
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Entry
E2K99_22150 CDS
T05937
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf00300
Lysine biosynthesis
hhf00470
D-Amino acid metabolism
hhf01100
Metabolic pathways
hhf01110
Biosynthesis of secondary metabolites
hhf01120
Microbial metabolism in diverse environments
hhf01230
Biosynthesis of amino acids
Module
hhf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E2K99_22150 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2K99_22150 (dapF)
Enzymes [BR:
hhf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E2K99_22150 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QBP77524
UniProt:
A0A4P7AEE0
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Position
4956869..4957732
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AA seq
287 aa
AA seq
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MKIKFTKMHGAGNDFVVLDAVNQAISLTPAQWQFIADRRFGIGADQMLVVEKAQAPGVDF
RYRIYNADGGEVEQCGNGARAFVRFVTEKGLTDKRAIRVETMSGVIEPRLEADGQITVDM
GAPILTPADVPFDSRGLQHRTEAEDTLWPLDVAGKTTWISVVSMGNPHAVQVVEDSEAAP
VLVDGPLIEHHERFPRRVNAGFMQVVDRHHINLRVYERGAGETLACGTGACAAVVAGIRR
GLLDSPVAVQTHGGVLNIAWAGPGEPVMMTGPAVTVFEGEIELPDSL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaatttaccaagatgcatggtgccggcaacgacttcgtcgtgcttgatgcc
gttaaccaggccatttcgctcaccccagcccagtggcagttcatcgccgaccgccgcttc
ggcatcggggccgaccagatgctggtggtggaaaaggcgcaagcccctggcgtcgatttc
cgttatcgcatctacaacgccgatggcggcgaggtggagcaatgcggcaacggcgcgcgc
gccttcgtgcgtttcgtcaccgaaaagggcctgaccgacaagcgggcgatccgggtggaa
accatgtccggcgtgatcgaaccgcgcctggaagcagacggccagatcaccgtggacatg
ggcgcgcccatcctcacgccggccgacgtccccttcgacagccgcggcctgcaacaccgc
accgaagccgaggacacgctgtggccgctggacgtggccggcaagaccacctggatctcg
gtggtgtcgatgggcaacccgcatgcggtgcaagtggtggaggacagcgaagcggccccg
gtcctggtggacggaccgctgatcgagcaccatgaacgttttcccaggcgcgtcaacgcg
ggcttcatgcaggtggtggatcgccatcacatcaatctgcgcgtctacgaacgcggtgca
ggagaaaccctggcctgcggcaccggcgcctgtgccgcggtcgtcgcgggtatccgccgt
ggcctgctggattcgccggtagcggtccagacccatggcggcgtgctcaacatcgcctgg
gccggcccgggcgaaccggtgatgatgaccggccctgcggtgacggtgtttgaaggcgaa
atcgaactgcctgattcgctttga
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