Halomonas hydrothermalis: CLM76_13900
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Entry
CLM76_13900 CDS
T05117
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh00550
Peptidoglycan biosynthesis
hhh01100
Metabolic pathways
hhh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM76_13900 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLM76_13900 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhh01011
]
CLM76_13900 (mrdA)
Enzymes [BR:
hhh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLM76_13900 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hhh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLM76_13900 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
Motif
Other DBs
NCBI-ProteinID:
ATH78609
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Position
2973651..2975558
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AA seq
635 aa
AA seq
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MPKRRDTLKNPEQELRIFRVRSLLAVFVVIVLTGLLVGRLGYLQIVQHDLYSTRSEKNRV
RVEPLPPNRGLIYDRNGALLAENRPTYNLTLVRERVDSLEDTLALLVELLELPEEEIEAF
NVRSRQRQRPFQPALLMSDLSEEQIARLAINRHRLPGVEVEAQLLRYYPDAEMMAHALGY
VGRINAEELQTLDTGRYAGTHFIGKTGVERFYESELHGQAGLRKVETNARGRVLRELGRT
DPVPGANLTLTLDRSLQMLAYELLEGRRGSIVAIVPRTGEILAMVSTPGFDSNQFVTGID
VASYRALQEDIDLPLFNRAIRGHYPPGSTIKPFLALAGLVEGVITPDSTINDPGFYQLPN
DSRRYRNWLRWGHGRVDMERSIAVSNNTYYYSLAHDLGIDRLHDQMSNFGFGQRVAHDVQ
GESTGLMPSRDWKRARFNQPWYPGETLSVGIGQGYWQITPLQLASATAALANRGHWVKPR
LALRIGEDPVPLELPDTLPDIDLANENWWDRVFNGMEKVLTGSEGTARRTGVGLEYRMGG
KSGTAQVFSLGQDQRYNAEELEERLRDHSLFMAFAPLEEPEIAVSVIVENAGGGSTHAAR
MARAMTDAWLLKEAAPEADEVKEVLEEDNGRVEGN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgccgtgacacgctaaagaaccctgagcaagagctgcgtatcttccgtgtt
cggtcgctgctggcagtgttcgtggtcatcgtcttgaccggtttgctggtcggtcggctg
gggtatctgcaaatcgtccagcacgacctctacagcacccgctccgagaaaaaccgcgtg
cgggtcgagccgctgccgcccaatcgcgggttgatctacgaccgtaacggcgccctgctg
gcagaaaatcgaccgacctacaacctgacgctggtgcgtgagcgtgtcgacagcctggag
gataccctggcgctgctggtggaacttctggagctgccggaagaagagatcgaggccttc
aacgttcgttctcgccagcgccagcggccgtttcagcccgcgctgctgatgagcgatctg
agtgaagagcagattgcccgcctggccatcaatcgccaccgcctgcccggggtcgaggta
gaagcccagctgctgcgttactacccggatgccgaaatgatggcccatgcgctgggctat
gtggggcggatcaatgccgaagagctgcaaaccctggacaccggccgctacgcaggcacc
cactttatcggcaagaccggagtggaacgtttttacgagtcggaattgcacggccaggcg
ggccttcgcaaggtcgaaaccaacgcccgtggccgggtgctgcgcgagctggggcgcacc
gacccggtacccggtgccaacctgaccctgaccctggaccgctcgcttcagatgcttgcc
tacgagctgctggagggtcggcgaggctccatcgtggccatcgtgccgcgcaccggagaa
attctggccatggtgtcgacgcctggtttcgatagcaaccagttcgtcaccgggatcgat
gtggcgtcttaccgcgccctgcaggaagacatcgacctgccgctgttcaaccgcgccatt
cgtggccactacccccctggttccaccatcaagccgtttctggcgctggcaggactggtg
gaaggggtgatcaccccggacagcaccatcaatgacccgggcttctatcaactgcccaat
gactcccgtcgctaccgtaactggttgcggtgggggcatgggcgtgtcgacatggaacgc
tccattgccgtgtcgaacaacacctactactactccctggcccacgaccttggcatcgat
cgcttgcatgatcagatgtccaactttggcttcgggcagcgggtcgctcacgacgttcag
ggagaaagcaccggcttgatgccgtctcgtgattggaagcgtgcacgcttcaaccagccc
tggtacccaggggaaaccctttcggtcggtatcggtcaggggtattggcagattaccccg
ctgcaactggccagtgccacggcggccttggccaaccgtggtcactgggtcaagcctcgg
ctggcgctgcgcattggtgaagaccccgtcccgctggaactgccggacacgttgcccgac
atcgacctggccaatgagaactggtgggacagagtgttcaacggcatggagaaagtgctc
accggcagcgaaggaacggcaaggcgcaccggggtgggcctggagtatcgcatgggcggc
aagtcgggtacggcccaggtgttttcgctgggtcaggatcagcgctacaacgccgaagag
ctggaagagcggctgcgcgaccactcgctgttcatggcctttgccccgctggaagagcct
gaaatcgccgtatcggtcatcgtcgagaatgccgggggcggcagtacccatgctgcccgc
atggcgcgcgccatgaccgatgcctggctgctgaaagaggcggcgccggaagccgatgag
gtcaaggaagtgctggaagaggataacggccgcgtggagggtaactga
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