Halomonas hydrothermalis: CLM76_16550
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Entry
CLM76_16550 CDS
T05117
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM76_16550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_16550
Enzymes [BR:
hhh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CLM76_16550
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CLM76_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ATH79105
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All DBs
Position
3537602..3538429
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AA seq
275 aa
AA seq
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MRLVSFNINGIRARLHQLQALIDTHRPDVIGLQEIKVQDSEFPLADVEAMGYHTFHYGQK
GHYGVALLCRQKPQQVFYGFPDDEEDAQRRMIGVRLLATDGQPVTVWNGYFPQGENVEHP
TKFPHKERFYQQLANLLATQHSPEEHLAVMGDFNISPEDQDIGIGEANRKRWLRDGKASF
QPIEREWLAGIKAWGLSDSYRLCHPDNSEWFSWFDYRSKGFDREPKRGLRIDYILVSPPL
AQRVTDAGIDYPLRAMERPSDHAPTWSDFSLTLAD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggtgtctttcaatatcaacggtatccgggcaaggctgcatcagctgcaagcg
ctcatcgacacccatcgccctgatgtgatcggcctgcaggaaatcaaggtgcaggatagc
gagtttcccttggccgacgtggaagccatggggtaccacacctttcattatggccaaaag
ggccactacggtgtggccttgctctgccgacagaaacctcagcaggtcttctacggcttt
cctgatgatgaggaagatgcccagcgacgcatgatcggcgtgcgcctactggctaccgac
ggccagccggtcaccgtgtggaacggctacttcccccagggcgagaacgtcgaacacccc
accaaatttcctcataaggagcgcttttaccagcagttggccaatctgctggccacgcag
cactccccggaagagcatctggccgtcatgggtgacttcaatatttcccccgaagaccag
gacatcggcattggggaagccaaccgaaaacgctggctgcgtgatggcaaggccagcttt
cagcccatcgagcgagagtggctagcgggcatcaaggcgtgggggctcagcgacagctat
cggctctgccaccccgacaacagcgaatggttcagctggttcgactaccgctcgaagggc
tttgaccgggagcccaagcgcggactgcgcatcgactacatccttgtctcgccccctctg
gcacagcgggtcaccgatgcaggtatcgactatcccctgcgcgccatggagcgaccttcg
gatcacgcgcccacctggagcgacttttcgctgacactggcggactga
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