Halobacteroides halobius: Halha_2309
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Entry
Halha_2309 CDS
T02401
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhl
Halobacteroides halobius
Pathway
hhl03420
Nucleotide excision repair
hhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halha_2309
03430 Mismatch repair
Halha_2309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhl03400
]
Halha_2309
Enzymes [BR:
hhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halha_2309
DNA repair and recombination proteins [BR:
hhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halha_2309
MMR (mismatch excision repair)
Other MMR factors
Halha_2309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DUF3553
ResIII
Phage_tail_T
Motif
Other DBs
NCBI-ProteinID:
AGB42183
UniProt:
L0KDM1
LinkDB
All DBs
Position
complement(2307011..2309122)
Genome browser
AA seq
703 aa
AA seq
DB search
MDILGGLNPEQQEAVEHNYGPLLILAGAGSGKTRVLTHRIAYLIHHYEVDPDNILTVTFT
NKAAEEMKDRAKNLLNLDRNLPWMGTFHSICVRILRREISNLGYSSNFVIFDTTDQRSLI
KNILKDLNFDTKKYTTSVLRAISSAKNELISPENYEQGGYLERVVARVYPVYQERLLENN
ALDFGDLIMKTVELLQKEPKVLDYYQELFKYILVDEYQDVNHAQYKLLYLLSAKYNNICV
VGDDDQGIYGFRGADVSNILNFEEDYTDTKVVRLEQNYRSTKKILDAAYHIVANNINRKE
KKLWTEKKAGKPLSLYKAQDGRDEARYITNQIKSLVEGEDKNYSDFSILYRTNAQSRVLE
RVLLQQDIPYRIVGGVKFYERKEIKDILAYLRLLYNPNDDLSLERIINVPRRGIGATNFK
RLQDYAQQHQISLLKAVNNVENIDSISTRFRNNIQEFGGLIEHFRKRKSEVSVAVLTEEL
LTETGYLANLKSKNTDKAQDRVNNIKELLASMEQFEEENQTGGLSEFLEEVALLSDIDNL
DQEEDAIVLMTLHSAKGLEFPVVFLAGMEENLLPHARSTDTEQDLAEERRLCYVGITRAE
EKLYLTYARKRKIYGRTQFKRPSRFIGHIPDHLFSEDNNETAVKNNRREARFSPGDKVKH
QRWGQGTVINVDDSSGMEQIKVSFPQQGVKALATEYAQLTKIN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggatattttaggaggactaaatcctgaacaacaggaagcagtagagcataattatggt
ccattattaattctagcaggtgctggtagtggtaagacaagggttttgactcatagaatt
gcctatctaattcatcattatgaagttgatcctgataatattcttacagttacatttacg
aataaggcagctgaagaaatgaaggatagagctaagaacttattaaatttagatagaaat
ttaccctggatgggaacattccattcaatatgtgttagaattttaagaagagagattagt
aatttaggttatagctctaattttgttattttcgatactacagatcaacgaagtttgatt
aagaatatcttaaaggacttaaattttgatactaagaaatataccacttctgtcttaagg
gcaattagtagcgctaaaaatgaattgatttctccagaaaattatgaacaaggtggttat
ttagagcgagtagtagctagagtttatccagtttaccaggagcgattattagagaataat
gccttagactttggtgacttaattatgaagacggtggaattgctgcaaaaagaacctaag
gtattagattattaccaagaactatttaaatatatattagttgatgagtaccaagatgtt
aatcatgctcagtataaattactttatttattatctgctaagtacaataacatttgtgtg
gtgggggatgatgatcaagggatctatggttttagaggagcagatgttagcaatattttg
aactttgaagaggattatacagatactaaagtagttagattagaacaaaattatcgttct
accaagaaaattttagatgcagcctatcatatagtagctaataatataaatcgtaaagaa
aagaaattatggactgagaaaaaagcaggcaaaccattatcattatataaagcccaagat
gggcgagatgaagcccgctacataactaatcaaattaagtctttagtagaaggtgaagat
aaaaattatagtgacttttctattttatatcgaactaatgctcaatctcgtgttttggaa
agagttttactacagcaagatattccctatcggatagtcgggggggttaagttctatgag
agaaaagagataaaggatatattagcttatttgcgcctgctttataatccaaatgatgat
cttagtttagaaagaatcattaatgtacctcgccgcgggattggagcaactaactttaag
cggcttcaagattatgcccaacaacaccagattagtttattaaaagcagttaataatgtt
gagaatatagatagtattagtactcgatttagaaataatatacaggaatttggaggttta
attgagcattttagaaaaaggaagagtgaagtatctgttgcagttttaacagaagagtta
ttaactgagactggttatttagctaacttaaagagtaaaaatacagataaagctcaagat
agagttaataatattaaggaattactagctagtatggaacagtttgaagaagaaaatcaa
actggaggtttaagtgagttcttagaagaagtagctttattatcagatattgataattta
gatcaagaagaggatgctatagtattaatgaccttacatagtgctaaaggtttggaattt
cctgttgtctttttagctggtatggaagagaatttattaccacatgctagatcaacagat
acagaacaagatttagcagaagaacgcaggttatgttatgtaggaattactagagcagaa
gaaaaattatatttaacctatgctcgtaaacgtaagatttatggtcgaactcaatttaag
aggccatctcgttttattgggcatattccagaccatttatttagtgaggataataatgaa
actgcagttaaaaataatagaagagaagctagattttctccaggagataaagtaaagcac
cagcgttggggccaaggtacagtaattaatgtagatgatagtagtggaatggaacaaata
aaagtttctttcccccaacaaggagttaaagcgttagcaactgaatatgcacagcttacc
aaaattaattga
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