KEGG   Halobacteroides halobius: Halha_2309
Entry
Halha_2309        CDS       T02401                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hhl  Halobacteroides halobius
Pathway
hhl03420  Nucleotide excision repair
hhl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Halha_2309
   03430 Mismatch repair
    Halha_2309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhl03400]
    Halha_2309
Enzymes [BR:hhl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Halha_2309
DNA repair and recombination proteins [BR:hhl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Halha_2309
   MMR (mismatch excision repair)
    Other MMR factors
     Halha_2309
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 Viral_helicase1 AAA_30 DUF3553 ResIII Phage_tail_T
Other DBs
NCBI-ProteinID: AGB42183
UniProt: L0KDM1
LinkDB
Position
complement(2307011..2309122)
AA seq 703 aa
MDILGGLNPEQQEAVEHNYGPLLILAGAGSGKTRVLTHRIAYLIHHYEVDPDNILTVTFT
NKAAEEMKDRAKNLLNLDRNLPWMGTFHSICVRILRREISNLGYSSNFVIFDTTDQRSLI
KNILKDLNFDTKKYTTSVLRAISSAKNELISPENYEQGGYLERVVARVYPVYQERLLENN
ALDFGDLIMKTVELLQKEPKVLDYYQELFKYILVDEYQDVNHAQYKLLYLLSAKYNNICV
VGDDDQGIYGFRGADVSNILNFEEDYTDTKVVRLEQNYRSTKKILDAAYHIVANNINRKE
KKLWTEKKAGKPLSLYKAQDGRDEARYITNQIKSLVEGEDKNYSDFSILYRTNAQSRVLE
RVLLQQDIPYRIVGGVKFYERKEIKDILAYLRLLYNPNDDLSLERIINVPRRGIGATNFK
RLQDYAQQHQISLLKAVNNVENIDSISTRFRNNIQEFGGLIEHFRKRKSEVSVAVLTEEL
LTETGYLANLKSKNTDKAQDRVNNIKELLASMEQFEEENQTGGLSEFLEEVALLSDIDNL
DQEEDAIVLMTLHSAKGLEFPVVFLAGMEENLLPHARSTDTEQDLAEERRLCYVGITRAE
EKLYLTYARKRKIYGRTQFKRPSRFIGHIPDHLFSEDNNETAVKNNRREARFSPGDKVKH
QRWGQGTVINVDDSSGMEQIKVSFPQQGVKALATEYAQLTKIN
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggatattttaggaggactaaatcctgaacaacaggaagcagtagagcataattatggt
ccattattaattctagcaggtgctggtagtggtaagacaagggttttgactcatagaatt
gcctatctaattcatcattatgaagttgatcctgataatattcttacagttacatttacg
aataaggcagctgaagaaatgaaggatagagctaagaacttattaaatttagatagaaat
ttaccctggatgggaacattccattcaatatgtgttagaattttaagaagagagattagt
aatttaggttatagctctaattttgttattttcgatactacagatcaacgaagtttgatt
aagaatatcttaaaggacttaaattttgatactaagaaatataccacttctgtcttaagg
gcaattagtagcgctaaaaatgaattgatttctccagaaaattatgaacaaggtggttat
ttagagcgagtagtagctagagtttatccagtttaccaggagcgattattagagaataat
gccttagactttggtgacttaattatgaagacggtggaattgctgcaaaaagaacctaag
gtattagattattaccaagaactatttaaatatatattagttgatgagtaccaagatgtt
aatcatgctcagtataaattactttatttattatctgctaagtacaataacatttgtgtg
gtgggggatgatgatcaagggatctatggttttagaggagcagatgttagcaatattttg
aactttgaagaggattatacagatactaaagtagttagattagaacaaaattatcgttct
accaagaaaattttagatgcagcctatcatatagtagctaataatataaatcgtaaagaa
aagaaattatggactgagaaaaaagcaggcaaaccattatcattatataaagcccaagat
gggcgagatgaagcccgctacataactaatcaaattaagtctttagtagaaggtgaagat
aaaaattatagtgacttttctattttatatcgaactaatgctcaatctcgtgttttggaa
agagttttactacagcaagatattccctatcggatagtcgggggggttaagttctatgag
agaaaagagataaaggatatattagcttatttgcgcctgctttataatccaaatgatgat
cttagtttagaaagaatcattaatgtacctcgccgcgggattggagcaactaactttaag
cggcttcaagattatgcccaacaacaccagattagtttattaaaagcagttaataatgtt
gagaatatagatagtattagtactcgatttagaaataatatacaggaatttggaggttta
attgagcattttagaaaaaggaagagtgaagtatctgttgcagttttaacagaagagtta
ttaactgagactggttatttagctaacttaaagagtaaaaatacagataaagctcaagat
agagttaataatattaaggaattactagctagtatggaacagtttgaagaagaaaatcaa
actggaggtttaagtgagttcttagaagaagtagctttattatcagatattgataattta
gatcaagaagaggatgctatagtattaatgaccttacatagtgctaaaggtttggaattt
cctgttgtctttttagctggtatggaagagaatttattaccacatgctagatcaacagat
acagaacaagatttagcagaagaacgcaggttatgttatgtaggaattactagagcagaa
gaaaaattatatttaacctatgctcgtaaacgtaagatttatggtcgaactcaatttaag
aggccatctcgttttattgggcatattccagaccatttatttagtgaggataataatgaa
actgcagttaaaaataatagaagagaagctagattttctccaggagataaagtaaagcac
cagcgttggggccaaggtacagtaattaatgtagatgatagtagtggaatggaacaaata
aaagtttctttcccccaacaaggagttaaagcgttagcaactgaatatgcacagcttacc
aaaattaattga

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