Helicobacter pylori Shi112: HPSH112_01175
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Entry
HPSH112_01175 CDS
T02037
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hhp
Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhp03400
]
HPSH112_01175
DNA repair and recombination proteins [BR:
hhp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPSH112_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Rubredoxin_2
AAA_25
DnaB_C
ChlI
Lon_C
AAA_24
AAA_16
NTPase_1
RecA
AAA_14
Rad51
ABC_tran
AAA_31
ATPase_2
NACHT
SLFN-g3_helicase
LexA_DNA_bind
AAA_5
nSTAND3
AAA_22
CbiA
Zeta_toxin
AAA_30
DAP3
GvpD_P-loop
ArsA_ATPase
ResIII
AAA
SRP54
MeaB
RsgA_GTPase
KTI12
Motif
Other DBs
NCBI-ProteinID:
AFI00466
LinkDB
All DBs
Position
230224..231570
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AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQAQKEVLNTLKNPIPKAQKSVSI
AEIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRNIAVFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSQEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANAVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgagtgtcagcattgcggttttacaagccctaagtgg
ctaggcaagtgcgttcaatgcaacgcatgggaaagttttatagaattgaaccaagctcaa
aaggaagttttaaacacgcttaaaaatccgatcccaaaagcgcaaaaaagcgtttctatc
gctgaaattgagcatgaagaagtgatcaagttttcttccactcaaagcgagttggatatt
gttttaggtggggggatcgctaaaggggggttgtatttggtgggggggagtcctggggtg
gggaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccactagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggctaat
attgaaagcgaaaattattttgcttgcgtgattgattccattcaaacgctttattcgcca
gagatttcttcagcacccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttggctaaaacaagaaatattgctgtttttatcatcggtcatatcactaaagaaggg
agcatcgcagggcctagagtgttagagcatatggtggatagcgtgctgtattttgaaggc
gatcccagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgaaatgaaagagcagggtttggtgagcgctaaagaagcttcaagc
ttgtttttttctcaagaagagcctatggaggggagcgcgatcaccatcactttagaaggc
tcaagggcgttgattttagagattcaggcgttggtgagcgagtgcagtttcggagcgccc
aaacgattagcgaacgggtttgacaccaaccgccttaacatgctcatcgctttattagaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcggagggatt
aagattagcgagccggcttgcgatttagcggtcattgccagcatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggcgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgccagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcctaaaaaacccagccaaaaaacctcgatcaaatgctatgaagccaatgcg
gtgggcaagattgttgaatggatgtga
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