KEGG   Helicobacter pylori Shi112: HPSH112_04960
Entry
HPSH112_04960     CDS       T02037                                 
Name
(GenBank) hypothetical protein
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
hhp  Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hhp03009]
    HPSH112_04960
Enzymes [BR:hhp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     HPSH112_04960
Ribosome biogenesis [BR:hhp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HPSH112_04960
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AFI01191
LinkDB
Position
complement(1014084..1014812)
AA seq 242 aa
MEKAYKILSVQENISHKKAKALIDLGLVSVGGKKLMVARKELPKNTHFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKGWVLLHRLDKETSGVILLVKENSEFHLKAKKAFKDR
AVKKEYLALAQGIIEEEQEINAPILTIKTTKAFSKISKKGQEAVTIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNEPSSAKRLMLHAHKIALLGYEFEAIPPKEF
EF
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaaaagcttataaaatattgagcgttcaagaaaacatttcgcataaaaaagccaaa
gctttgattgatttggggttagtgagtgtaggggggaagaaattgatggttgctagaaaa
gaattacctaaaaacacgcattttagcgtccaaaaggttgaaaaacccagcgtgattttt
gaagatgaaaacattctagccctttttaaacctccctttatagagagctatgatctggtt
tcttttttcaaaggttgggttttgttgcaccgcttggataaagaaacaagcggggtgatt
ttattggtgaaagaaaattcagaattccacttaaaagctaaaaaggcttttaaagacagg
gcggttaaaaaggagtatttagcgctcgctcaaggcattatagaagaagagcaagaaatt
aacgctcccattcttacgattaaaaccactaaagctttcagtaaaatctctaaaaaaggg
caagaagcggttacgataatcacgcctttaaaaatcatcaacaaaaaaacccttttaaaa
gtgggaatcaaaaccggaagaacgcatcaaatcagagtccatttaaagcacatcaaccac
cccattataggcgatacgctttataataatgagccaagttcagccaaacgcttgatgctc
catgcgcataaaatcgcgctactagggtatgaatttgaagcgatcccccctaaagaattt
gaattttaa

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