Helicobacter pylori Shi112: HPSH112_06755
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Entry
HPSH112_06755 CDS
T02037
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPSH112_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhp03400
]
HPSH112_06755
Enzymes [BR:
hhp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPSH112_06755
DNA repair and recombination proteins [BR:
hhp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPSH112_06755
Prokaryotic type
HPSH112_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFI01538
LinkDB
All DBs
Position
complement(1369789..1370490)
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AA seq
233 aa
AA seq
DB search
MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLKNQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVSVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKI
AQKKIDLIPKNKHIIITAPHPSPLSRGFLGSGVFTSIQNAHREVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaagctctaaaaagccct
aaaaccattttccctaaaagctccaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcatccttttagggcaagatccctaccattccacctacctaaaaaatcag
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgtctgtgccttgt
tgcggggatttgagcgcatgggctaaaaggggcatgctgttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccaacgctcccttgatcgtggtgttattaggaaagatc
gcgcaaaaaaagatcgatctaatccccaaaaacaagcacatcatcatcaccgcccctcac
cctagccccttatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagaggtttatcataaggattttgattttagtttatga
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