Candidatus Pantoea carbekii: HHS_01570
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Entry
HHS_01570 CDS
T02865
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HHS_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhs03400
]
HHS_01570
Enzymes [BR:
hhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HHS_01570
DNA repair and recombination proteins [BR:
hhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HHS_01570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
DEAD
nSTAND3
Herpes_Helicase
AAA_33
UvrD_C
ResIII
ABC_tran
SRP54
AAA_16
Flavi_DEAD
DO-GTPase1
MukB
T2SSE
CbiA
FtsK_SpoIIIE
TrwB_AAD_bind
LCAT
AAA_28
AAA
ATPase
AAA_7
RsgA_GTPase
Zeta_toxin
BCS1_N
Motif
Other DBs
NCBI-ProteinID:
BAO00127
UniProt:
U3U703
LinkDB
All DBs
Position
226266..228119
Genome browser
AA seq
617 aa
AA seq
DB search
MTDMIQLLEHAATLNLFRALDIQFAQLVTNNSQPARLLAAACLSAKVGDGHVCLPLSQLT
CELLFKGRHPELAHAIWKAAGQPKDWYTIFYGWSAISIIGSKTAPIVLVADRLYLHRLWQ
DEGKIARFFQQQSILQDFEFNQVRIVLDQFFGTQEENFHKIAAAAAITQKITIICGGPGT
GKTTTVAKLLAALIRLSKGKIRIQLTAPTGKAAARLSEALHKTLHQLSISKNEENSFPKK
AVTLHCLLGAHPQTQRLHYHDKHHLHLDVLVVDETSMVDLSMMTKLIAALPLKARVIFLG
DHHQLASVEVGAIFGDICRCAEAGYSTVRASQLRKLTGCYVYGNNNAYAPVIRDSICLLR
KNYRFHFNSGIAQLASAVLNGNTQLMEDLLKSSLTDINRHSINSSQTYETMLEQVIEGYS
PILRLIQKNHDPIEILTAFNLYQLLCVLREGPFGIEGLNQRIEQKLRKMQLIRCSCSINT
TNFWYQGRPIMVTRNDSILGLSNGDVGITMYDRQGFLKVFFLLDNNKVKMVQPNRLPTHN
TTWAMTVHKSQGSEFDHVALVMPTHCLPVLTRELIYTAITRARNKLTLYGDHNIFSYAIQ
LRTQRNSGLLERLCVSI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatgatacagctattagaacacgcagcaacattaaacttatttcgtgcatta
gatattcaatttgctcaattagtcactaacaactctcaacccgcacgtctcctagcagca
gcttgtctaagcgctaaagttggtgatggacatgtttgcctgccattgtcgcagttaact
tgtgaattgctttttaaaggacgtcatcctgagcttgctcatgcaatttggaaagcagct
ggtcaaccgaaagattggtatactatattttatggttggtcagcaattagcattattggt
agcaaaacagcaccaattgttttggttgcagatcgactttatctacatcgattatggcaa
gatgaagggaaaatagcacgttttttccaacagcaatctatattgcaagattttgaattt
aatcaagttcgcattgttctagatcagttctttggaactcaagaagaaaattttcataaa
attgctgctgcagcagcaataacccaaaaaattacaataatatgtggaggtcctggaact
ggtaaaactactacagtagcaaagttattagcagcattgattcgactaagtaaagggaaa
atacggattcagttaacagctcctacaggaaaagcagcagcacgtttaagtgaagctctt
cacaaaacgttacatcaactttcgataagtaaaaacgaagaaaatagttttcctaaaaaa
gcagtaacactgcattgtttattaggagcacatccgcaaacacaacgtcttcattatcat
gataaacatcatttgcatctcgatgtattagtagtagatgaaacttctatggttgatttg
agtatgatgacaaagttaatagctgctttaccattaaaagcacgtgtcatttttctcggt
gaccatcatcagctagcttccgtagaggtaggtgctatctttggtgatatttgccgctgt
gctgaagctgggtacagtactgtacgtgcttcacagcttagaaagcttaccggctgttat
gtctatggtaataataatgcgtacgcaccagttatccgtgattctatttgtctgttgcga
aaaaattatcgttttcattttaattctggtattgctcagttagcatcagctgtacttaat
ggaaatactcaattaatggaagacttattaaaatctagccttactgatattaatcgtcat
tcaataaactctagtcaaacttatgaaactatgttagaacaagtaatagaaggttatagt
ccaattttacggttgattcaaaaaaatcatgatcctatagaaattttaactgcattcaac
ttgtatcaacttttatgtgttcttcgagagggaccattcgggattgaagggttaaatcag
cgcattgagcaaaagttaagaaaaatgcaattaattcgctgttcttgtagtataaatact
actaatttttggtatcaaggacgaccaataatggtaactcgtaacgatagtatactgggg
ttatctaatggggatgtaggtattactatgtatgatcgtcaaggttttctaaaagtattt
tttctattagataataataaagttaaaatggtacaaccaaaccgtttgccaactcataat
acgacatgggctatgacggtacataaatcacaaggatcagaatttgatcatgttgcgtta
gtaatgccaacacattgtctgccagtactaactcgagaattaatctatactgcaattact
cgtgcgcgcaataaattaactttatatggtgatcataacattttttcttatgctatacaa
ttacgcactcaacgaaatagtggcttactagaacgattatgtgtttctatttaa
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